RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 OPA1O60313 960 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 SDC3O75056 442 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 SRPRAP08240 638 aaKnown RBP17.51■□□□□ 0.39
TRA2B-202ENST00000342294 DRD3P35462 400 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 CTSOP43234 321 aaPredicted RBP17.51■□□□□ 0.39
TRA2B-202ENST00000342294 AFMP43652 599 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 PSMD8P48556 350 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 GABREP78334 506 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 CEP135Q66GS9 1140 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 MSANTD2Q6P1R3 559 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 KCNE4Q8WWG9 221 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 MYEOVQ96EZ4 313 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 PRICKLE1Q96MT3 831 aaPredicted RBP17.51■□□□□ 0.39
TRA2B-202ENST00000342294 DPH1Q9BZG8 443 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 ASCL3Q9NQ33 180 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 CISHQ9NSE2 258 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 ABCC13Q9NSE7 274 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 SLCO3A1Q9UIG8 710 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 FRMD4BQ9Y2L6 1034 aa17.51■□□□□ 0.39
TRA2B-202ENST00000342294 TBC1D3DA0A087WVF3 549 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 TBC1D3IA0A087WXS9 549 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 TBC1D3EA0A087X179 549 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 TBC1D3KA0A087X1G2 549 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 TBC1D3FA6NER0 549 aaPredicted RBP17.5■□□□□ 0.39
TRA2B-202ENST00000342294 TBC1D3LB9A6J9 549 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 ACSL4O60488 711 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 MAGEC1O60732 1142 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 ADH1BP00325 375 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 TBC1D3HP0C7X1 549 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 TRIM49P0CI25 452 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 TRIM49CP0CI26 452 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 SLC8A3P57103 927 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 ADIGQ0VDE8 80 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 TBC1D3GQ6DHY5 549 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 NADSYN1Q6IA69 706 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 TBC1D3CQ6IPX1 549 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 TBC1D3Q8IZP1 549 aaPredicted RBP17.5■□□□□ 0.39
TRA2B-202ENST00000342294 SCML4Q8N228 414 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 STK40Q8N2I9 435 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 TTC39CQ8N584 583 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 OR4C6Q8NH72 309 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 PTPRN2Q92932 1015 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 TATDN2Q93075 761 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 AZIN2Q96A70 460 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 POLR1BQ9H9Y6 1135 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 LRRC4Q9HBW1 653 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 STIM2Q9P246 746 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 CYTH4Q9UIA0 394 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 DMTF1Q9Y222 760 aa17.5■□□□□ 0.39
TRA2B-202ENST00000342294 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.49■□□□□ 0.39
TRA2B-202ENST00000342294 KLK10O43240 276 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 USP12O75317 370 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 GIMD1P0DJR0 217 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 MZF1P28698 734 aaPredicted RBP17.49■□□□□ 0.39
TRA2B-202ENST00000342294 NUDT1P36639 197 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 SLC11A2P49281 568 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 MCCD1P59942 119 aaPredicted RBP17.49■□□□□ 0.39
TRA2B-202ENST00000342294 RPS24P62847 133 aaKnown RBP17.49■□□□□ 0.39
TRA2B-202ENST00000342294 ENPEPQ07075 957 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 GOLGA7BQ2TAP0 167 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 FSCBQ5H9T9 825 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 PITRM1Q5JRX3 1037 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 MMS22LQ6ZRQ5 1243 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 PRPF39Q86UA1 669 aaKnown RBP17.49■□□□□ 0.39
TRA2B-202ENST00000342294 UNC45BQ8IWX7 931 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 GRAMD1CQ8IYS0 662 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 HJURPQ8NCD3 748 aaPredicted RBP17.49■□□□□ 0.39
TRA2B-202ENST00000342294 SEMA4DQ92854 862 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 DEPDC7Q96QD5 511 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 KDM4CQ9H3R0 1056 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 TRAF3IP3Q9Y228 551 aa17.49■□□□□ 0.39
TRA2B-202ENST00000342294 A0A1B0GVM2 712 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 SLC28A2O43868 658 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 LZTS3O60299 673 aaPredicted RBP17.48■□□□□ 0.39
TRA2B-202ENST00000342294 CKMT1AP12532 417 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 PDIA4P13667 645 aaKnown RBP17.48■□□□□ 0.39
TRA2B-202ENST00000342294 DGKAP23743 735 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 METAP1P53582 386 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 DAOAP59103 153 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 SKOR1P84550 965 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 DAB2P98082 770 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 NUGGCQ68CJ6 796 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 IGF2-ASQ6U949 168 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.48■□□□□ 0.39
TRA2B-202ENST00000342294 INTS8Q75QN2 995 aaKnown RBP17.48■□□□□ 0.39
TRA2B-202ENST00000342294 CCDC150Q8NCX0 1101 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 KCTD13Q8WZ19 329 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
TRA2B-202ENST00000342294 TMEM8AQ9HCN3 771 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 UCKL1Q9NWZ5 548 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 TSPAN16Q9UKR8 245 aa17.48■□□□□ 0.39
TRA2B-202ENST00000342294 K7ENP7 123 aa17.47■□□□□ 0.39
TRA2B-202ENST00000342294 SLC7A4O43246 635 aa17.47■□□□□ 0.39
TRA2B-202ENST00000342294 CSO75390 466 aaKnown RBP17.47■□□□□ 0.39
TRA2B-202ENST00000342294 GABBR2O75899 941 aa17.47■□□□□ 0.39
TRA2B-202ENST00000342294 YEATS4O95619 227 aa17.47■□□□□ 0.39
TRA2B-202ENST00000342294 MAT2AP31153 395 aaKnown RBP17.47■□□□□ 0.39
TRA2B-202ENST00000342294 ECT2LQ008S8 904 aa17.47■□□□□ 0.39
TRA2B-202ENST00000342294 SRSF1Q07955 248 aaKnown RBP eCLIP17.47■□□□□ 0.393e-8■□□□□ 9.4
TRA2B-202ENST00000342294 BST2Q10589 180 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms