RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TMEFF1Q8IYR6 380 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 ABCA7Q8IZY2 2146 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 CFAP52Q8N1V2 620 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 CYB5D2Q8WUJ1 264 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 CPA5Q8WXQ8 436 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 MKRN2Q9H000 416 aaKnown RBP13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 PCED1AQ9H1Q7 454 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 WDCPQ9H6R7 721 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 ITM2CQ9NQX7 267 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 ARHGEF38Q9NXL2 777 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 COX16Q9P0S2 106 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 CYP8B1Q9UNU6 501 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 CLDN11O75508 207 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 PTGER3P43115 390 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 NSFP46459 744 aaKnown RBP13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 SULT1E1P49888 294 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 ZNF165P49910 485 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 GSCP56915 257 aaPredicted RBP13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 RNASE9P60153 205 aaKnown RBP13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 CENPCQ03188 943 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 DEUP1Q05D60 604 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 ZNF33AQ06730 810 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 AUHQ13825 339 aaKnown RBP13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 CCDC6Q16204 474 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 PLEKHG6Q3KR16 790 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 C5orf22Q49AR2 442 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 SYCP2LQ5T4T6 812 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 RNF219Q5W0B1 726 aaPredicted RBP13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 IL31Q6EBC2 164 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 PPP1R2P3Q6NXS1 205 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 DHX40Q8IX18 779 aaKnown RBP13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 CCAR2Q8N163 923 aaKnown RBP13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 FRMD1Q8N878 549 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 CADM4Q8NFZ8 388 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 SLC20A1Q8WUM9 679 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 PIGKQ92643 395 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 MYEOVQ96EZ4 313 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 ZNF419Q96HQ0 510 aaPredicted RBP13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 C1orf74Q96LT6 269 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 RPRD1AQ96P16 312 aaPredicted RBP13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 NUP58Q9BVL2 599 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 NUSAP1Q9BXS6 441 aaKnown RBP13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 PIGVQ9NUD9 493 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 TMEM59LQ9UK28 342 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 PILRBQ9UKJ0 227 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 SCML1Q9UN30 329 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 SDK1Q7Z5N4 2213 aa13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 TNRC6BQ9UPQ9 1833 aaKnown RBP13.76□□□□□ -0.21
SIRPB3P-201ENST00000340424 ITIH6Q6UXX5 1313 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 LNP1A1A4G5 178 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 TARSL2A2RTX5 802 aaKnown RBP13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 GDF9O60383 454 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 PAGE1O75459 146 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 CALB1P05937 261 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 UNGP13051 313 aaPredicted RBP13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 ATP1A3P13637 1013 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 FERP16591 822 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 CHRNB2P17787 502 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 RDXP35241 583 aaKnown RBP13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 NNMTP40261 264 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 TPMTP51580 245 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 PLK1P53350 603 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 CDH4P55283 916 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 TPM4P67936 248 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 ECT2LQ008S8 904 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 HNRNPA1L2Q32P51 320 aaKnown RBP13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 TTC31Q49AM3 519 aaPredicted RBP13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 FSCBQ5H9T9 825 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 WDR45BQ5MNZ6 344 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 STPG1Q5TH74 334 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 OTUD1Q5VV17 481 aaPredicted RBP13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 FBXL22Q6P050 247 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 SLC23A3Q6PIS1 610 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 LRRC31Q6UY01 552 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 BNIPLQ7Z465 357 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 EDEM2Q9BV94 578 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 TKTL2Q9H0I9 626 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 SLC6A17Q9H1V8 727 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 PRSS16Q9NQE7 514 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 WSB2Q9NYS7 404 aaPredicted RBP13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 SUSD2Q9UGT4 822 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 INTS6Q9UL03 887 aaKnown RBP13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 ERVW-1Q9UQF0 538 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 HS3ST4Q9Y661 456 aa13.75□□□□□ -0.21
SIRPB3P-201ENST00000340424 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 EDDM13A0A1B0GTR0 161 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 A0A1W2PQC6 194 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 GOLGA8SH3BPF8 625 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 RNASEH1O60930 286 aaKnown RBP13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 HLA-EP13747 358 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 GNSP15586 552 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 FLT3P36888 993 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 ZNF177Q13360 481 aaPredicted RBP13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 DUOXA1Q1HG43 343 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 TRIM61Q5EBN2 209 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 ZNF776Q68DI1 518 aaPredicted RBP13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 MMS22LQ6ZRQ5 1243 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 ARMCX6Q7L4S7 300 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 PHF13Q86YI8 300 aaPredicted RBP13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 TOE1Q96GM8 510 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms