RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 TMC7Q7Z402 723 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 FLAD1Q8NFF5 587 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 PNPLA8Q9NP80 782 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 TCF7L2Q9NQB0 619 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 CACNG4Q9UBN1 327 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 BCLAF3A2AJT9 711 aaKnown RBP16.52■□□□□ 0.24
SCARB1-202ENST00000339570 SRGAP2BP0DMP2 458 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 ARF4P18085 180 aaPredicted RBP16.52■□□□□ 0.24
SCARB1-202ENST00000339570 HDCP19113 662 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 NAGLUP54802 743 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 FKBP1CQ5VVH2 108 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 CYP2R1Q6VVX0 501 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 KYAT3Q6YP21 454 aaKnown RBP16.52■□□□□ 0.24
SCARB1-202ENST00000339570 ILDR2Q71H61 639 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 AMIGO2Q86SJ2 522 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 FAM192AQ9GZU8 254 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 PRDM12Q9H4Q4 367 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 IARS2Q9NSE4 1012 aaKnown RBP16.52■□□□□ 0.24
SCARB1-202ENST00000339570 NUP205Q92621 2012 aa16.52■□□□□ 0.23
SCARB1-202ENST00000339570 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.52■□□□□ 0.23
SCARB1-202ENST00000339570 ONECUT3O60422 494 aaPredicted RBP16.52■□□□□ 0.23
SCARB1-202ENST00000339570 MX2P20592 715 aa16.52■□□□□ 0.23
SCARB1-202ENST00000339570 ACAT1P24752 427 aaKnown RBP16.52■□□□□ 0.23
SCARB1-202ENST00000339570 LMO2P25791 158 aa16.52■□□□□ 0.23
SCARB1-202ENST00000339570 INHBCP55103 352 aa16.52■□□□□ 0.23
SCARB1-202ENST00000339570 GOLGA2P5Q9HBQ8 144 aa16.52■□□□□ 0.23
SCARB1-202ENST00000339570 GBA2Q9HCG7 927 aaPredicted RBP16.52■□□□□ 0.23
SCARB1-202ENST00000339570 C20orf96Q9NUD7 363 aaPredicted RBP16.52■□□□□ 0.23
SCARB1-202ENST00000339570 HOXC10Q9NYD6 342 aa16.52■□□□□ 0.23
SCARB1-202ENST00000339570 SNX10Q9Y5X0 201 aa16.52■□□□□ 0.23
SCARB1-202ENST00000339570 SF3B1O75533 1304 aaKnown RBP eCLIP16.51■□□□□ 0.231e-6■■■■■ 69.2
SCARB1-202ENST00000339570 ZBTB42B2RXF5 422 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 CLDN5O00501 218 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 MBTD1Q05BQ5 628 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 TSHZ1Q6ZSZ6 1077 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 ARCQ7LC44 396 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 RAB3IL1Q8TBN0 382 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 SUDS3Q9H7L9 328 aaPredicted RBP16.51■□□□□ 0.23
SCARB1-202ENST00000339570 DDX43Q9NXZ2 648 aaKnown RBP16.51■□□□□ 0.23
SCARB1-202ENST00000339570 TUBGCP4Q9UGJ1 667 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 BIRC5O15392 142 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 PFDN1O60925 122 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 TXNP10599 105 aaKnown RBP16.51■□□□□ 0.23
SCARB1-202ENST00000339570 TSHRP16473 764 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 AKAP5P24588 427 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 RXRBP28702 533 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 FDFT1P37268 417 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 SULT1E1P49888 294 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 DYNC1I2Q13409 638 aaKnown RBP16.51■□□□□ 0.23
SCARB1-202ENST00000339570 NADK2Q4G0N4 442 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 ANKRD20A4Q4UJ75 823 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 GPAMQ9HCL2 828 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 AP4B1Q9Y6B7 739 aa16.51■□□□□ 0.23
SCARB1-202ENST00000339570 BPTFQ12830 3046 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.5■□□□□ 0.23
SCARB1-202ENST00000339570 INSRRP14616 1297 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 TSPAN8P19075 237 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 ART3Q13508 389 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 KIZQ2M2Z5 673 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 NCBP2-AS2Q69YL0 99 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 FSTL4Q6MZW2 842 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 OLFM3Q96PB7 478 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 CYP4F12Q9HCS2 524 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 CHRAC1Q9NRG0 131 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 SNTG2Q9NY99 539 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 ENDOD1O94919 500 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 PIGNO95427 931 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 NDUFV1P49821 464 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 NME5P56597 212 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 PRAMEP78395 509 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 MS4A2Q01362 244 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 TTLL12Q14166 644 aaPredicted RBP16.5■□□□□ 0.23
SCARB1-202ENST00000339570 MAP7Q14244 749 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 SLC9A4Q6AI14 798 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 METTL7BQ6UX53 244 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 MRPL1Q9BYD6 325 aaKnown RBP16.5■□□□□ 0.23
SCARB1-202ENST00000339570 PCDHAC1Q9H158 963 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 MOCS1Q9NZB8 636 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 DCDC2Q9UHG0 476 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 PRKCGP05129 697 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 PIK3R1P27986 724 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 PLK1P53350 603 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 R3HDM1Q15032 1099 aaKnown RBP16.5■□□□□ 0.23
SCARB1-202ENST00000339570 PQLC1Q8N2U9 271 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 GRIN3AQ8TCU5 1115 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 ACTRT2Q8TDY3 377 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 ZFAND2BQ8WV99 257 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 KHSRPQ92945 711 aaKnown RBP eCLIP16.5■□□□□ 0.23
SCARB1-202ENST00000339570 CERS2Q96G23 380 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 GPR20Q99678 358 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 GATA5Q9BWX5 397 aaPredicted RBP16.5■□□□□ 0.23
SCARB1-202ENST00000339570 NME7Q9Y5B8 376 aa16.5■□□□□ 0.23
SCARB1-202ENST00000339570 RALGDSQ12967 914 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 DCAF15Q66K64 600 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 ZNF280DQ6N043 979 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 DSELQ8IZU8 1212 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 DEFB106AQ8N104 65 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 ARNTL2Q8WYA1 636 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 CELF6Q96J87 481 aaKnown RBP16.49■□□□□ 0.23
SCARB1-202ENST00000339570 ATXN3LQ9H3M9 355 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms