RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 CCDC63Q8NA47 563 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 SLC39A13Q96H72 371 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 IGSF21Q96ID5 467 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 ACSS3Q9H6R3 686 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 NDFIP2Q9NV92 336 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 COL4A6Q14031 1691 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 MYO16Q9Y6X6 1858 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 LAMA2P24043 3122 aaKnown RBP17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 OPHN1O60890 802 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 ATF6P18850 670 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 PTPN3P26045 913 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 PSMB4P28070 264 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 OR1D2P34982 312 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 PHBP35232 272 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 ZNF135P52742 658 aaPredicted RBP17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 GALNT2Q10471 571 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 EFEMP1Q12805 493 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 PKN2Q16513 984 aaKnown RBP17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 MSANTD2Q6P1R3 559 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 PID1Q7Z2X4 250 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 SRRM1Q8IYB3 904 aaKnown RBP17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 TOP1MTQ969P6 601 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 MIEF2Q96C03 454 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 SIGLEC10Q96LC7 697 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 SERPINB11Q96P15 392 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 EBF2Q9HAK2 575 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 SUFUQ9UMX1 484 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 HS3ST4Q9Y661 456 aa17.59■□□□□ 0.41
ATAD3A-201ENST00000339113 TRIM43BA6NCK2 446 aa17.58■□□□□ 0.41
ATAD3A-201ENST00000339113 CSF2RAP15509 400 aa17.58■□□□□ 0.41
ATAD3A-201ENST00000339113 GARSP41250 739 aaKnown RBP17.58■□□□□ 0.41
ATAD3A-201ENST00000339113 CRYMQ14894 314 aa17.58■□□□□ 0.41
ATAD3A-201ENST00000339113 USP41Q3LFD5 358 aa17.58■□□□□ 0.41
ATAD3A-201ENST00000339113 ARHGAP36Q6ZRI8 547 aa17.58■□□□□ 0.41
ATAD3A-201ENST00000339113 RNF168Q8IYW5 571 aaPredicted RBP17.58■□□□□ 0.41
ATAD3A-201ENST00000339113 TRIM43Q96BQ3 446 aaPredicted RBP17.58■□□□□ 0.41
ATAD3A-201ENST00000339113 CFAP36Q96G28 342 aa17.58■□□□□ 0.41
ATAD3A-201ENST00000339113 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.58■□□□□ 0.41
ATAD3A-201ENST00000339113 PIH1D1Q9NWS0 290 aaKnown RBP17.58■□□□□ 0.41
ATAD3A-201ENST00000339113 RAD54BQ9Y620 910 aa17.58■□□□□ 0.41
ATAD3A-201ENST00000339113 TCRBV9S1A1TA0A576 114 aa17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 TMEM120BA0PK00 339 aa17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 SNX3O60493 162 aa17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 FDFT1P37268 417 aa17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 GJA8P48165 433 aa17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 GEMIN4P57678 1058 aaKnown RBP17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 PIK3R6Q5UE93 754 aa17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 SLC8B1Q6J4K2 584 aa17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 PRPF39Q86UA1 669 aaKnown RBP17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 GBP7Q8N8V2 638 aaPredicted RBP17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 HDAC11Q96DB2 347 aa17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 SPATA17Q96L03 361 aa17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 PRMT1Q99873 361 aaKnown RBP17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 GORASP1Q9BQQ3 440 aa17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 FRMD8Q9BZ67 464 aaPredicted RBP17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 MPP6Q9NZW5 540 aa17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 MTRRQ9UBK8 725 aa17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 TLR6Q9Y2C9 796 aa17.58■□□□□ 0.4
ATAD3A-201ENST00000339113 NUP205Q92621 2012 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 RASA4BC9J798 803 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 NCAM2O15394 837 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 RASA4O43374 803 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 STK10O94804 968 aaKnown RBP17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 RTN3O95197 1032 aaPredicted RBP17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 OAS1P00973 400 aaKnown RBP17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 ATP5DP30049 168 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 MLLT6P55198 1093 aaPredicted RBP17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 ZBTB17Q13105 803 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 OLIG2Q13516 323 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 PSMD5Q16401 504 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 PARP6Q2NL67 630 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 MIB1Q86YT6 1006 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 ARHGAP12Q8IWW6 846 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 ARHGAP18Q8N392 663 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 RIBC1Q8N443 379 aaPredicted RBP17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 ZSCAN18Q8TBC5 510 aaPredicted RBP17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 DPF3Q92784 378 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 ZNF689Q96CS4 500 aaPredicted RBP17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 KIF9Q9HAQ2 790 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 MAGED2Q9UNF1 606 aaPredicted RBP17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 MYO18AQ92614 2054 aaKnown RBP17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 PLXNA3P51805 1871 aa17.57■□□□□ 0.4
ATAD3A-201ENST00000339113 ZBTB24O43167 697 aaPredicted RBP17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 C1QAP02745 245 aa17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 ALADP13716 330 aa17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 BRAFP15056 766 aa17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 HOXC13P31276 330 aa17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 CD68P34810 354 aaPredicted RBP17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 SERPINB6P35237 376 aa17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 TUBP50607 506 aa17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 TBX4P57082 545 aa17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 SPARCL1Q14515 664 aa17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 TRABD2AQ86V40 505 aa17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 PAFAH2Q99487 392 aa17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 ELAC2Q9BQ52 826 aaKnown RBP17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 CLSTN3Q9BQT9 956 aa17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 DHRS4Q9BTZ2 278 aa17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 KCNK9Q9NPC2 374 aa17.56■□□□□ 0.4
ATAD3A-201ENST00000339113 CLIC5Q9NZA1 410 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms