RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 TTC16Q8NEE8 873 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ADAMTS19Q8TE59 1207 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.16■□□□□ 0.024e-10■□□□□ 9.4
CDK5RAP3-201ENST00000338399 ART4Q93070 314 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 AZIN2Q96A70 460 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ZNF707Q96C28 371 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SLC46A2Q9BY10 475 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ZNF446Q9NWS9 450 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 AGO1Q9UL18 857 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CLUHO75153 1309 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 DRGXA6NNA5 263 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 WASH4PA8MWX3 477 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 DNALI1O14645 258 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 NCAM2O15394 837 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 MOSPD3O75425 235 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 FGF19O95750 216 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 RHOQP17081 205 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TNNT3P45378 269 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 GALNT2Q10471 571 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 PRKD1Q15139 912 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TEAD2Q15562 447 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SLC5A9Q2M3M2 681 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 GPR158Q5T848 1215 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 EMBQ6PCB8 327 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ELMSAN1Q6PJG2 1045 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 GRASPQ7Z6J2 395 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 LZTR1Q8N653 840 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 C12orf76Q8N812 135 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 DEPDC1BQ8WUY9 529 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 HTR3CQ8WXA8 447 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 LRRC45Q96CN5 670 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 RTP4Q96DX8 246 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ANAPC5Q9UJX4 755 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 HELZP42694 1942 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 DFFAO00273 331 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TRDMT1O14717 391 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SCAMP3O14828 347 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TP73O15350 636 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 MX2P20592 715 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ACTN2P35609 894 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 GARSP41250 739 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SLC7A9P82251 487 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CIR1Q86X95 450 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ARHGAP12Q8IWW6 846 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CFAP52Q8N1V2 620 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 BBOF1Q8ND07 529 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 VN1R2Q8NFZ6 395 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 MRPL38Q96DV4 380 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 P2RY11Q96G91 374 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 FMO2Q99518 471 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SLC39A8Q9C0K1 460 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ADAM7Q9H2U9 754 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 IGFLR1Q9H665 355 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TMEM248Q9NWD8 314 aa15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TPX2Q9ULW0 747 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-201ENST00000338399 PPIDQ08752 370 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ARHGAP15Q53QZ3 475 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ADGRF1Q5T601 910 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CHRDL2Q6WN34 429 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 LEMD2Q8NC56 503 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CCDC110Q8TBZ0 833 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CAVIN3Q969G5 261 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 HDAC11Q96DB2 347 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 SMG9Q9H0W8 520 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PIDD1Q9HB75 910 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 SEPT10Q9P0V9 454 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 NYNRINQ9P2P1 1898 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TNRC18O15417 2968 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 MYO18AQ92614 2054 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 GREM1O60565 184 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PFKLP17858 780 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 DDX6P26196 483 aaKnown RBP eCLIP15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 C5orf22Q49AR2 442 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PRSS36Q5K4E3 855 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 HIBCHQ6NVY1 386 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 RHBDF2Q6PJF5 856 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TMC5Q6UXY8 1006 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ARHGAP36Q6ZRI8 547 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 SMG7Q92540 1137 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 FERMT1Q9BQL6 677 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 BRD8Q9H0E9 1235 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PAK5Q9P286 719 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CFAP97Q9P2B7 532 aa15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 MTRF1LQ9UGC7 380 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZFP37Q9Y6Q3 630 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TRANK1O15050 2925 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 C5orf60A6NFR6 353 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 KCNK1O00180 336 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TSPAN3O60637 253 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 GCATO75600 419 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 POU2F2P09086 479 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 RPS24P62847 133 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 BASP1P80723 227 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 KCNC3Q14003 757 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 RABGAP1LQ5R372 815 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 RNASEH2BQ5TBB1 312 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 AFMIDQ63HM1 303 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CMTM8Q8IZV2 173 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 UMODL1-AS1Q8N2C9 162 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PRICKLE1Q96MT3 831 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms