RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CLVS1Q8IUQ0 354 aaPredicted RBP14.02□□□□□ -0.17
RTN4-202ENST00000337526 PSTKQ8IV42 348 aaKnown RBP14.02□□□□□ -0.17
RTN4-202ENST00000337526 PCDH20Q8N6Y1 951 aaKnown RBP14.02□□□□□ -0.17
RTN4-202ENST00000337526 IL31RAQ8NI17 732 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 METTL6Q8TCB7 284 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 OPTNQ96CV9 577 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 RNF145Q96MT1 663 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 SNRNP25Q9BV90 132 aaKnown RBP14.02□□□□□ -0.17
RTN4-202ENST00000337526 PAIP1Q9H074 479 aaKnown RBP14.02□□□□□ -0.17
RTN4-202ENST00000337526 SALL4Q9UJQ4 1053 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 ATRNO75882 1429 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 SYNCRIPO60506 623 aaKnown RBP14.02□□□□□ -0.17
RTN4-202ENST00000337526 NOL4O94818 638 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 CYP1A1P04798 512 aaPredicted RBP14.02□□□□□ -0.17
RTN4-202ENST00000337526 ALOX15P16050 662 aaPredicted RBP14.02□□□□□ -0.17
RTN4-202ENST00000337526 TSHRP16473 764 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 HPCAP84074 193 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 IL5RAQ01344 420 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 PPP4R4Q6NUP7 873 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 RNF180Q86T96 592 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 B3GALNT2Q8NCR0 500 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 WNT8BQ93098 351 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 ULBP1Q9BZM6 244 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 FAM192AQ9GZU8 254 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 IL22Q9GZX6 179 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 TKTL2Q9H0I9 626 aa14.02□□□□□ -0.17
RTN4-202ENST00000337526 MGAT4DA6NG13 374 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 EDF1O60869 148 aaKnown RBP14.01□□□□□ -0.17
RTN4-202ENST00000337526 CPSF4O95639 269 aaKnown RBP14.01□□□□□ -0.17
RTN4-202ENST00000337526 KRT6AP02538 564 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 KRT6BP04259 564 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 KRT6CP48668 564 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 CCNG1P51959 295 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 FBXW4P57775 412 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 CDC16Q13042 620 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 CASP10Q92851 521 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 CERS2Q96G23 380 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 SMARCD1Q96GM5 515 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 WDR41Q9HAD4 459 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 SELENONQ9NZV5 590 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 MPP6Q9NZW5 540 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 OR1E1P30953 314 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 TBX4P57082 545 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 FKBP1AP62942 108 aaKnown RBP14.01□□□□□ -0.17
RTN4-202ENST00000337526 MSLNQ13421 630 aaPredicted RBP14.01□□□□□ -0.17
RTN4-202ENST00000337526 FRG1Q14331 258 aaKnown RBP14.01□□□□□ -0.17
RTN4-202ENST00000337526 C16orf72Q14CZ0 275 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 CCDC142Q17RM4 750 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 SCARA3Q6AZY7 606 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 C11orf96Q7Z7L8 435 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 ROGDIQ9GZN7 287 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 USE1Q9NZ43 259 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 A0A1W2PPM1 405 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 EFCAB14O75071 495 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 PARNO95453 639 aaKnown RBP14.01□□□□□ -0.17
RTN4-202ENST00000337526 TRUB2O95900 331 aaKnown RBP14.01□□□□□ -0.17
RTN4-202ENST00000337526 BCL10O95999 233 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 MBL2P11226 248 aaPredicted RBP14.01□□□□□ -0.17
RTN4-202ENST00000337526 PLEKHM3Q6ZWE6 761 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 CARNMT1Q8N4J0 409 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 DHRSXQ8N5I4 330 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 FIG4Q92562 907 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 MIEF2Q96C03 454 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 FAM84AQ96KN4 292 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 PCDHB18PQ96TA0 734 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 DMAP1Q9NPF5 467 aaPredicted RBP14.01□□□□□ -0.17
RTN4-202ENST00000337526 TMCC3Q9ULS5 477 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 GNG14A0A1W2PPG7 69 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 PSMD12O00232 456 aaPredicted RBP14.01□□□□□ -0.17
RTN4-202ENST00000337526 KATNA1O75449 491 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 RECQL4O94761 1208 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 LCA5LO95447 670 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 HALP42357 657 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 YAF2Q8IY57 180 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 LPCAT1Q8NF37 534 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 KREMEN1Q96MU8 473 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 PURBQ96QR8 312 aaKnown RBP14.01□□□□□ -0.17
RTN4-202ENST00000337526 SEMA6AQ9H2E6 1030 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 HSD3B7Q9H2F3 369 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 POMKQ9H5K3 350 aa14.01□□□□□ -0.17
RTN4-202ENST00000337526 ROBO3Q96MS0 1386 aa14□□□□□ -0.17
RTN4-202ENST00000337526 TMEM114B3SHH9 223 aa14□□□□□ -0.17
RTN4-202ENST00000337526 CELF2O95319 508 aaKnown RBP14□□□□□ -0.17
RTN4-202ENST00000337526 NCALDP61601 193 aa14□□□□□ -0.17
RTN4-202ENST00000337526 NEDD8Q15843 81 aa14□□□□□ -0.17
RTN4-202ENST00000337526 ZNF280DQ6N043 979 aa14□□□□□ -0.17
RTN4-202ENST00000337526 ARCQ7LC44 396 aa14□□□□□ -0.17
RTN4-202ENST00000337526 UNC93AQ86WB7 457 aa14□□□□□ -0.17
RTN4-202ENST00000337526 DLG3Q92796 817 aa14□□□□□ -0.17
RTN4-202ENST00000337526 EBNA1BP2Q99848 306 aaKnown RBP14□□□□□ -0.17
RTN4-202ENST00000337526 GLIS2Q9BZE0 524 aaPredicted RBP14□□□□□ -0.17
RTN4-202ENST00000337526 ENTPD7Q9NQZ7 604 aa14□□□□□ -0.17
RTN4-202ENST00000337526 FBXO6Q9NRD1 293 aaPredicted RBP14□□□□□ -0.17
RTN4-202ENST00000337526 ADARB2Q9NS39 739 aaKnown RBP14□□□□□ -0.17
RTN4-202ENST00000337526 RNF19AQ9NV58 838 aa14□□□□□ -0.17
RTN4-202ENST00000337526 COPG2Q9UBF2 871 aa14□□□□□ -0.17
RTN4-202ENST00000337526 OR12D3Q9UGF7 316 aa14□□□□□ -0.17
RTN4-202ENST00000337526 MRPL42Q9Y6G3 142 aaKnown RBP14□□□□□ -0.17
RTN4-202ENST00000337526 LINC00854A0A1B0GVQ3 168 aa14□□□□□ -0.17
RTN4-202ENST00000337526 TCRBV9S1A1TA0A576 114 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms