RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 FAM159BA6NKW6 160 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 GOLGA8TH3BQL2 631 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 SPTLC1O15269 473 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 KLHL2O95198 593 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 AKAP5P24588 427 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 WASHC5Q12768 1159 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 KYAT3Q6YP21 454 aaKnown RBP16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 SLC15A3Q8IY34 581 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 NAT14Q8WUY8 206 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 KCTD15Q96SI1 283 aaPredicted RBP16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 CXCL16Q9H2A7 254 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 TXNRD2Q9NNW7 524 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 ARHGEF4Q9NR80 690 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 TNS1Q9HBL0 1735 aaKnown RBP16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 C22orf31O95567 290 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 MX2P20592 715 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 SLC26A2P50443 739 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 HPCAP84074 193 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 TRIP10Q15642 601 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 SOWAHAQ2M3V2 549 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 PDPK2PQ6A1A2 396 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 TMEM53Q6P2H8 277 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 TMEM216Q9P0N5 145 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 COMMD3-BMI1R4GMX3 469 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 CAPN14A8MX76 684 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 PDLIM1O00151 329 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 SORBS2O94875 1100 aaKnown RBP16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 CCDC166P0CW27 439 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 ACTR3P61158 418 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 LPCAT4Q643R3 524 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 DEFB106AQ8N104 65 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 SREK1Q8WXA9 508 aaKnown RBP16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 PLAC1Q9HBJ0 212 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.92■□□□□ 0.33e-6■■■■□ 22.8
CDC42EP4-201ENST00000335793 SUN2Q9UH99 717 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 DCDC2Q9UHG0 476 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 PPME1Q9Y570 386 aa16.92■□□□□ 0.3
CDC42EP4-201ENST00000335793 WDR81Q562E7 1941 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 COL11A1P12107 1806 aaPredicted RBP16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 AIM2O14862 343 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 MDM4O15151 490 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 BIRC5O15392 142 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 GCATO75600 419 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 LGALS2P05162 132 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 POLBP06746 335 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 GNL1P36915 607 aaPredicted RBP16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 RAP1GDS1P52306 607 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 ARCQ7LC44 396 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 TTC39CQ8N584 583 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 ADAM32Q8TC27 787 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 SLC2A14Q8TDB8 520 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 AZIN2Q96A70 460 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 SYBUQ9NX95 663 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 A0A0A0MRY4 1105 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 SIN3BO75182 1162 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 ALDOAP04075 364 aaKnown RBP16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 SERPINE1P05121 402 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 CPA3P15088 417 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 OXCT1P55809 520 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 BEST2Q8NFU1 509 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 KCNN1Q92952 543 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 P2RY11Q96G91 374 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 SCYL1Q96KG9 808 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 DHRS1Q96LJ7 313 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 SPATA13Q96N96 652 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 MED10Q9BTT4 135 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 CCDC106Q9BWC9 280 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 TMEM98Q9Y2Y6 226 aa16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 HEMK1Q9Y5R4 338 aaPredicted RBP16.91■□□□□ 0.3
CDC42EP4-201ENST00000335793 F8W8V4 182 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 PLIN3O60664 434 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 PSMD7P51665 324 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 TEX44Q53QW1 395 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 C4orf22Q6V702 233 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 OR52K1Q8NGK4 314 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 TSNARE1Q96NA8 513 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 PRDM12Q9H4Q4 367 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 LRRC4Q9HBW1 653 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 UBP1Q9NZI7 540 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 RBMX2Q9Y388 322 aaKnown RBP16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 ADM5C9JUS6 153 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 MFSD11O43934 449 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 DGKIO75912 1065 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 LMO2P25791 158 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 SERPINB5P36952 375 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 NR2C2P49116 596 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 TBCCQ15814 346 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 TEDDM1Q5T9Z0 273 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 ZNF534Q76KX8 674 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 STRA8Q7Z7C7 330 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 SLC35F5Q8WV83 523 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 CLIP3Q96DZ5 547 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 MOCOSQ96EN8 888 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 ECSITQ9BQ95 431 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 CAB39LQ9H9S4 337 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 TSC22D4Q9Y3Q8 395 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 TMEM247A6NEH6 219 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 M0QYT0 321 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 TPSB2P20231 275 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms