RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SLFN11Q7Z7L1 901 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 CCDC36Q8IYA8 594 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 RUSC1Q9BVN2 902 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 LOC110117498-PIK3R3F6TDL0 507 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 TEX28O15482 410 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 SNAP91O60641 907 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 KCNH1O95259 989 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 UQCRBP14927 111 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 TPH1P17752 444 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 GP5P40197 560 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 CD151P48509 253 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 GRB10Q13322 594 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 TIGD7Q6NT04 549 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-201ENST00000334504 ERICH5Q6P6B1 374 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 MAP3K14Q99558 947 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 VPS45Q9NRW7 570 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 EFR3BQ9Y2G0 817 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 PPP2R3BQ9Y5P8 575 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 AFF2P51816 1311 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 CNTNAP5Q8WYK1 1306 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 IQCMA0A1B0GVH7 501 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 TULP2O00295 520 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 ABLIM1O14639 778 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 ECDO95905 644 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-201ENST00000334504 RPL14P50914 215 aaKnown RBP9.99□□□□□ -0.81
COL4A6-201ENST00000334504 PRKCEQ02156 737 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 FAM131AQ6UXB0 335 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 RBM43Q6ZSC3 357 aaKnown RBP9.99□□□□□ -0.81
COL4A6-201ENST00000334504 FBXO39Q8N4B4 442 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 ZNF512Q96ME7 567 aaPredicted RBP9.99□□□□□ -0.81
COL4A6-201ENST00000334504 ARMC7Q9H6L4 198 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 ZMYM5Q9UJ78 669 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 TBX20Q9UMR3 447 aa9.99□□□□□ -0.81
COL4A6-201ENST00000334504 IGSF9BQ9UPX0 1349 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 A8MUI8 341 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 TADA2AO75478 443 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 CYP2C8P10632 490 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 NAA20P61599 178 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 RBBP4Q09028 425 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 AMHR2Q16671 573 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 TTI2Q6NXR4 508 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 AMIGO2Q86SJ2 522 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 GSDMCQ9BYG8 508 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 RARAP10276 462 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 HARS2P49590 506 aaKnown RBP9.98□□□□□ -0.81
COL4A6-201ENST00000334504 ZNF543Q08ER8 600 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 SPANXN3Q5MJ09 141 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 ANKS6Q68DC2 871 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 CES3Q6UWW8 571 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 REXO5Q96IC2 774 aaKnown RBP9.98□□□□□ -0.81
COL4A6-201ENST00000334504 TBATAQ96M53 351 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 MBOAT7Q96N66 472 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 CEP41Q9BYV8 373 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 PTGFRNQ9P2B2 879 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 SCAF8Q9UPN6 1271 aaKnown RBP9.98□□□□□ -0.81
COL4A6-201ENST00000334504 SPACA6W5XKT8 324 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 TRIM38O00635 465 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 HPGDP15428 266 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 RPA1P27694 616 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 CRABP2P29373 138 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 RAB25P57735 213 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 BST2Q10589 180 aaKnown RBP9.98□□□□□ -0.81
COL4A6-201ENST00000334504 SEZ6Q53EL9 994 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 CD302Q8IX05 232 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 ATP6V0D2Q8N8Y2 350 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 SP140LQ9H930 580 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 C8orf4Q9NR00 106 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 MCUBQ9NWR8 336 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 ARHGAP28Q9P2N2 729 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 AP4E1Q9UPM8 1137 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 LYVE1Q9Y5Y7 322 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 ARAP3Q8WWN8 1544 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 PSMD12O00232 456 aaPredicted RBP9.98□□□□□ -0.81
COL4A6-201ENST00000334504 PIGNO95427 931 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 CYP2F1P24903 491 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 RAP1GAPP47736 663 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 PTPAQ15257 358 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 MGAT5BQ3V5L5 792 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 LPCAT4Q643R3 524 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 ZNF621Q6ZSS3 439 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 NAT14Q8WUY8 206 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 N6AMT1Q9Y5N5 214 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 ATP7BP35670 1465 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 C15orf38-AP3S2A0A0A6YYH1 394 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 DPPA5A6NC42 116 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 MAGEB2O15479 319 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 GZMAP12544 262 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 ITGB6P18564 788 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 TMEM62Q0P6H9 643 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 POU6F1Q14863 301 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 LDLRAP1Q5SW96 308 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 ARPINQ7Z6K5 226 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 OR8H1Q8NGG4 311 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 LRRC4BQ9NT99 713 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 MAPRE3Q9UPY8 281 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 DGKBQ9Y6T7 804 aa9.98□□□□□ -0.81
COL4A6-201ENST00000334504 TPP1O14773 563 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 CTSHP09668 335 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 TUBA4AP68366 448 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 CDKAL1Q5VV42 579 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms