RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 C1orf21Q9H246 121 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 PRDM12Q9H4Q4 367 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 SNX15Q9NRS6 342 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 CPSF2Q9P2I0 782 aaKnown RBP12.63□□□□□ -0.39
VPS33B-201ENST00000333371 SLC45A1Q9Y2W3 748 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 CLDN5O00501 218 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 STK10O94804 968 aaKnown RBP12.63□□□□□ -0.39
VPS33B-201ENST00000333371 IGFBP6P24592 240 aaPredicted RBP12.63□□□□□ -0.39
VPS33B-201ENST00000333371 CRABP2P29373 138 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 MSX2P35548 267 aaPredicted RBP12.63□□□□□ -0.39
VPS33B-201ENST00000333371 NR2C2P49116 596 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 SULT1E1P49888 294 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 AQP4P55087 323 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 ABCE1P61221 599 aaKnown RBP12.63□□□□□ -0.39
VPS33B-201ENST00000333371 CFAP157Q5JU67 520 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 LRRC8BQ6P9F7 803 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 SLC26A9Q7LBE3 791 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 CDKL2Q92772 493 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 APBB2Q92870 758 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 NXF3Q9H4D5 531 aaKnown RBP12.63□□□□□ -0.39
VPS33B-201ENST00000333371 DDX43Q9NXZ2 648 aaKnown RBP12.63□□□□□ -0.39
VPS33B-201ENST00000333371 MORF4L1Q9UBU8 362 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 CDH22Q9UJ99 828 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-201ENST00000333371 UNCXA6NJT0 531 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 H3BRB1 525 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 AP1G2O75843 785 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 BEST1O76090 585 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 PGAM1P18669 254 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 ITGAXP20702 1163 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 ARL4AP40617 200 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 INHBEP58166 350 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 SARNPP82979 210 aaKnown RBP12.62□□□□□ -0.39
VPS33B-201ENST00000333371 NME3Q13232 169 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 MSLNQ13421 630 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-201ENST00000333371 TMCO4Q5TGY1 634 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 OTUD1Q5VV17 481 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-201ENST00000333371 MTHFD1LQ6UB35 978 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 GPR142Q7Z601 462 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 DHDDSQ86SQ9 333 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 PPP4R1Q8TF05 950 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 KBTBD7Q8WVZ9 684 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 ZNF669Q96BR6 464 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-201ENST00000333371 TUT1Q9H6E5 874 aaKnown RBP12.62□□□□□ -0.39
VPS33B-201ENST00000333371 TXNDC16Q9P2K2 825 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 TRIP12Q14669 1992 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-201ENST00000333371 FAM72CH0Y354 149 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 NEMP1O14524 444 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 LTFP02788 710 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 DESP17661 470 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 HOXA11P31270 313 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-201ENST00000333371 SERPINB6P35237 376 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 SATB1Q01826 763 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 ADIGQ0VDE8 80 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 TBCCQ15814 346 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 FAM72AQ5TYM5 149 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 SYPL2Q5VXT5 272 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 FAM72DQ6L9T8 149 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 PID1Q7Z2X4 250 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 ANKRD23Q86SG2 305 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 FAM72BQ86X60 149 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 OR6J1Q8NGC5 347 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 OR6Y1Q8NGX8 325 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 ATP2A3Q93084 1043 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 OR52B2Q96RD2 323 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 COG4Q9H9E3 785 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.62□□□□□ -0.39
VPS33B-201ENST00000333371 FZD10Q9ULW2 581 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 COL1A2P08123 1366 aa12.62□□□□□ -0.39
VPS33B-201ENST00000333371 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.61□□□□□ -0.39
VPS33B-201ENST00000333371 ETS2P15036 469 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 CPA3P15088 417 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 ZFXP17010 805 aaPredicted RBP12.61□□□□□ -0.39
VPS33B-201ENST00000333371 SAT1P21673 171 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 ACAT1P24752 427 aaKnown RBP12.61□□□□□ -0.39
VPS33B-201ENST00000333371 CNTFP26441 200 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 POU5F1BQ06416 359 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 CDK18Q07002 472 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 BST2Q10589 180 aaKnown RBP12.61□□□□□ -0.39
VPS33B-201ENST00000333371 DLG1Q12959 904 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 PPP2R5DQ14738 602 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 MARCH8Q5T0T0 291 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 MAMDC4Q6UXC1 1216 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 HFE2Q6ZVN8 426 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 ZNF467Q7Z7K2 595 aaPredicted RBP12.61□□□□□ -0.39
VPS33B-201ENST00000333371 RNF169Q8NCN4 708 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 RNF139Q8WU17 664 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 EMID1Q96A84 441 aaPredicted RBP12.61□□□□□ -0.39
VPS33B-201ENST00000333371 MFSD3Q96ES6 412 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 CERS2Q96G23 380 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 GBP5Q96PP8 586 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 PARK7Q99497 189 aaKnown RBP12.61□□□□□ -0.39
VPS33B-201ENST00000333371 GORASP1Q9BQQ3 440 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 GCOM2Q9BZD3 368 aaPredicted RBP12.61□□□□□ -0.39
VPS33B-201ENST00000333371 WDR55Q9H6Y2 383 aaPredicted RBP12.61□□□□□ -0.39
VPS33B-201ENST00000333371 GPAMQ9HCL2 828 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 ANLNQ9NQW6 1124 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 CACNG4Q9UBN1 327 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 DCDC2Q9UHG0 476 aa12.61□□□□□ -0.39
VPS33B-201ENST00000333371 POMPQ9Y244 141 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms