RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 CTBP1Q13363 440 aa12.08□□□□□ -0.47
EFCAB13-201ENST00000331493 PPM1LQ5SGD2 360 aa12.08□□□□□ -0.47
EFCAB13-201ENST00000331493 ERO1BQ86YB8 467 aa12.08□□□□□ -0.47
EFCAB13-201ENST00000331493 TDRD5Q8NAT2 981 aaKnown RBP12.08□□□□□ -0.47
EFCAB13-201ENST00000331493 PHC3Q8NDX5 983 aa12.08□□□□□ -0.47
EFCAB13-201ENST00000331493 SLC10A4Q96EP9 437 aa12.08□□□□□ -0.47
EFCAB13-201ENST00000331493 KCNK16Q96T55 309 aa12.08□□□□□ -0.47
EFCAB13-201ENST00000331493 FRMD8Q9BZ67 464 aaPredicted RBP12.08□□□□□ -0.47
EFCAB13-201ENST00000331493 SIRPGQ9P1W8 387 aa12.08□□□□□ -0.47
EFCAB13-201ENST00000331493 CNTN3Q9P232 1028 aa12.08□□□□□ -0.47
EFCAB13-201ENST00000331493 DCDC2Q9UHG0 476 aa12.08□□□□□ -0.47
EFCAB13-201ENST00000331493 STAP1Q9ULZ2 295 aa12.08□□□□□ -0.47
EFCAB13-201ENST00000331493 IGKV6-21A0A0C4DH24 114 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 FAM72CH0Y354 149 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 GABBR2O75899 941 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 TSPAN8P19075 237 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 IGFBP6P24592 240 aaPredicted RBP12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 GP5P40197 560 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 GABRB2P47870 512 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 FAM72AQ5TYM5 149 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 SLC9A4Q6AI14 798 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 FAM72DQ6L9T8 149 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 FRMD7Q6ZUT3 714 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 FAM72BQ86X60 149 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 NMD3Q96D46 503 aaKnown RBP12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 ECSITQ9BQ95 431 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 ULBP1Q9BZM6 244 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 RUVBL2Q9Y230 463 aaKnown RBP12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 SSX2IPQ9Y2D8 614 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 SLC4A7Q9Y6M7 1214 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 FAM159BA6NKW6 160 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 SOCS7O14512 581 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 ADCY6O43306 1168 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 LTFP02788 710 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 IDH3AP50213 366 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 SLC9B1Q4ZJI4 515 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 ZNF534Q76KX8 674 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 ZNF483Q8TF39 744 aaPredicted RBP12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 CMTM5Q96DZ9 223 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 CDRT15Q96T59 188 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 PLAC1Q9HBJ0 212 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 CHST12Q9NRB3 414 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 COPG2Q9UBF2 871 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 APPL1Q9UKG1 709 aa12.08□□□□□ -0.48
EFCAB13-201ENST00000331493 SPTLC1O15269 473 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 ZBTB24O43167 697 aaPredicted RBP12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 NELFEP18615 380 aaKnown RBP12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 EDNRBP24530 442 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 ARL1P40616 181 aaPredicted RBP12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 SLC26A2P50443 739 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 NME5P56597 212 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 CDC16Q13042 620 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 MPP3Q13368 585 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 ANKRD52Q8NB46 1076 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.482e-11■■■■□ 19.3
EFCAB13-201ENST00000331493 LRRC39Q96DD0 335 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 CNBD2Q96M20 576 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 ZNF778Q96MU6 729 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 LENG8Q96PV6 779 aaPredicted RBP12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 OR52B2Q96RD2 323 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 RHOBTB2Q9BYZ6 727 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 VPS33BQ9H267 617 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 PLEKHA5Q9HAU0 1116 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 CAPN8A6NHC0 703 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 LYNP07948 512 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 MYL3P08590 195 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 PGAM1P18669 254 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 NFKB1P19838 968 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 TKTP29401 623 aaKnown RBP12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 FDFT1P37268 417 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 CCNA1P78396 465 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 IRX1P78414 480 aaPredicted RBP12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 FSTL4Q6MZW2 842 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 NOTUMQ6P988 496 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 KYAT3Q6YP21 454 aaKnown RBP12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 OTOP3Q7RTS5 596 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 ANKRD13AQ8IZ07 590 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 SPATA22Q8NHS9 363 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 LRGUKQ96M69 825 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 TCF7L2Q9NQB0 619 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 ZNF180Q9UJW8 692 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 NME7Q9Y5B8 376 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 STX16-NPEPL1H3BU86 382 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 PEX1O43933 1283 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 GCATO75600 419 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 PIGNO95427 931 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 C2P06681 752 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 FGF3P11487 239 aaPredicted RBP12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 TAF6P49848 677 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 AQP4P55087 323 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 ARHGAP1Q07960 439 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 WASHC5Q12768 1159 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 RBBP5Q15291 538 aaKnown RBP12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 CYTH1Q15438 398 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 TAZQ16635 292 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 C9orf57Q5W0N0 161 aa12.07□□□□□ -0.48
EFCAB13-201ENST00000331493 SLC27A1Q6PCB7 646 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms