RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 EPS8L3Q8TE67 593 aaKnown RBP16.3■□□□□ 0.2
PDGFB-201ENST00000331163 TOX2Q96NM4 488 aa16.3■□□□□ 0.2
PDGFB-201ENST00000331163 SMYD2Q9NRG4 433 aa16.3■□□□□ 0.2
PDGFB-201ENST00000331163 FAM187AA6NFU0 413 aa16.3■□□□□ 0.2
PDGFB-201ENST00000331163 F5H5T6 163 aa16.3■□□□□ 0.2
PDGFB-201ENST00000331163 SEMG2Q02383 582 aa16.3■□□□□ 0.2
PDGFB-201ENST00000331163 COLGALT1Q8NBJ5 622 aa16.3■□□□□ 0.2
PDGFB-201ENST00000331163 UNKQ9C0B0 810 aaKnown RBP16.3■□□□□ 0.2
PDGFB-201ENST00000331163 ARHGEF4Q9NR80 690 aa16.3■□□□□ 0.2
PDGFB-201ENST00000331163 WDR81Q562E7 1941 aa16.3■□□□□ 0.2
PDGFB-201ENST00000331163 DAB1O75553 588 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 ADH1AP07327 375 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 PBX2P40425 430 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 POU5F1Q01860 360 aaKnown RBP16.29■□□□□ 0.2
PDGFB-201ENST00000331163 PDK2Q15119 407 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 XKR4Q5GH76 650 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 ANKRD22Q5VYY1 191 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 CENPUQ71F23 418 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 C14orf80Q86SX3 495 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 ATP11CQ8NB49 1132 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 CD101Q93033 1021 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 RMDN1Q96DB5 314 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 RBM22Q9NW64 420 aaKnown RBP eCLIP16.29■□□□□ 0.2
PDGFB-201ENST00000331163 CTNNAL1Q9UBT7 734 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 COMMD10Q9Y6G5 202 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 APOC4-APOC2K7ER74 178 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 RASGRF2O14827 1237 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 SPAG7O75391 227 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 APOC2P02655 101 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 IRS1P35568 1242 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 GRIA1P42261 906 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 ERVFC1P60507 584 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 GPR17Q13304 367 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 ZNF235Q14590 738 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 PPP2R2DQ66LE6 453 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 ZNF461Q8TAF7 563 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 FAXDC2Q96IV6 333 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 CLSTN3Q9BQT9 956 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 OSER1Q9NX31 292 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 A0A0G2JMZ2 1700 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 CHD7Q9P2D1 2997 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 ARHGAP42A6NI28 874 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 PPP1R12AO14974 1030 aaPredicted RBP16.29■□□□□ 0.2
PDGFB-201ENST00000331163 CNTN5O94779 1100 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 PSMB4P28070 264 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 L1CAMP32004 1257 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 SCNN1BP51168 640 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 EPHB1P54762 984 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 VSTM1Q6UX27 236 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 C3orf62Q6ZUJ4 267 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 AGAP11Q8TF27 550 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 KLHL29Q96CT2 875 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 SERPINB11Q96P15 392 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 TRIM33Q9UPN9 1127 aa16.29■□□□□ 0.2
PDGFB-201ENST00000331163 DRD4P21917 467 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 CRYMQ14894 314 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 UBAP2Q5T6F2 1119 aaKnown RBP16.28■□□□□ 0.2
PDGFB-201ENST00000331163 ARHGAP36Q6ZRI8 547 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 OTOP3Q7RTS5 596 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 CDKL3Q8IVW4 592 aaPredicted RBP16.28■□□□□ 0.2
PDGFB-201ENST00000331163 TRAIPQ9BWF2 469 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 CFHR5Q9BXR6 569 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 CIPCQ9C0C6 399 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 IQCGQ9H095 443 aaKnown RBP16.28■□□□□ 0.2
PDGFB-201ENST00000331163 VPS28Q9UK41 221 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 NENFQ9UMX5 172 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 SQORQ9Y6N5 450 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 CCDC189A1A4V9 331 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 M0QZQ0 153 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 STAU1O95793 577 aaKnown RBP16.28■□□□□ 0.2
PDGFB-201ENST00000331163 CDH5P33151 784 aaPredicted RBP16.28■□□□□ 0.2
PDGFB-201ENST00000331163 PCK1P35558 622 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 SLC11A2P49281 568 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 ARL4CP56559 192 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 PDK1Q15118 436 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 HERC6Q8IVU3 1022 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 ATP6V0D2Q8N8Y2 350 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 SLC43A3Q8NBI5 491 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 SPATA22Q8NHS9 363 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 GDPD5Q8WTR4 605 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 MYLIPQ8WY64 445 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 RUBCNQ92622 972 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 ETNK1Q9HBU6 452 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 CPQQ9Y646 472 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 UBOX5O94941 541 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 TNFRSF8P28908 595 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 CORO1AP31146 461 aaKnown RBP16.28■□□□□ 0.2
PDGFB-201ENST00000331163 SERPINB6P35237 376 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 BBS12Q6ZW61 710 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 OR6P1Q8NGX9 317 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 HTR3CQ8WXA8 447 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 RPL10LQ96L21 214 aaKnown RBP16.28■□□□□ 0.2
PDGFB-201ENST00000331163 CDC42EP4Q9H3Q1 356 aaKnown RBP16.28■□□□□ 0.2
PDGFB-201ENST00000331163 ACTL7AQ9Y615 435 aa16.28■□□□□ 0.2
PDGFB-201ENST00000331163 LOXHD1Q8IVV2 1947 aa16.27■□□□□ 0.2
PDGFB-201ENST00000331163 TCRBV7S3A2A0A539 114 aa16.27■□□□□ 0.2
PDGFB-201ENST00000331163 SOD2P04179 222 aa16.27■□□□□ 0.2
PDGFB-201ENST00000331163 MAGEA4P43358 317 aa16.27■□□□□ 0.2
PDGFB-201ENST00000331163 POU6F1Q14863 301 aa16.27■□□□□ 0.2
PDGFB-201ENST00000331163 WLSQ5T9L3 541 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms