RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ATP6V1E2Q96A05 226 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 PCDHA11Q9Y5I1 949 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 SPTLC1O15269 473 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 DCKP27707 260 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 MAGEA6P43360 314 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 ZNF132P52740 706 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 SP4Q02446 784 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 NR1D2Q14995 579 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 CLPPQ16740 277 aaPredicted RBP24.88■■□□□ 1.57
SOX1-201ENST00000330949 MCUQ8NE86 351 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 FNIP1Q8TF40 1166 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 TRUB1Q8WWH5 349 aaKnown RBP24.88■■□□□ 1.57
SOX1-201ENST00000330949 OLFM1Q99784 485 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 TRPV6Q9H1D0 765 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 RNPEPQ9H4A4 650 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 IPO11Q9UI26 975 aaKnown RBP24.88■■□□□ 1.57
SOX1-201ENST00000330949 B3GNT3Q9Y2A9 372 aa24.88■■□□□ 1.57
SOX1-201ENST00000330949 HTRA2O43464 458 aaPredicted RBP24.87■■□□□ 1.57
SOX1-201ENST00000330949 EXTL3O43909 919 aa24.87■■□□□ 1.57
SOX1-201ENST00000330949 KRT3P12035 628 aa24.87■■□□□ 1.57
SOX1-201ENST00000330949 SLC10A2Q12908 348 aaPredicted RBP24.87■■□□□ 1.57
SOX1-201ENST00000330949 RFTN1Q14699 578 aaPredicted RBP24.87■■□□□ 1.57
SOX1-201ENST00000330949 ZNF781Q8N8C0 355 aa24.87■■□□□ 1.57
SOX1-201ENST00000330949 OR52B2Q96RD2 323 aa24.87■■□□□ 1.57
SOX1-201ENST00000330949 CCPG1Q9ULG6 757 aa24.87■■□□□ 1.57
SOX1-201ENST00000330949 ERGIC3Q9Y282 383 aa24.87■■□□□ 1.57
SOX1-201ENST00000330949 MYCLP12524 364 aaPredicted RBP24.87■■□□□ 1.57
SOX1-201ENST00000330949 BMXP51813 675 aa24.87■■□□□ 1.57
SOX1-201ENST00000330949 XKR9Q5GH70 373 aa24.87■■□□□ 1.57
SOX1-201ENST00000330949 NPNTQ6UXI9 565 aa24.87■■□□□ 1.57
SOX1-201ENST00000330949 ZNF354CQ86Y25 554 aa24.87■■□□□ 1.57
SOX1-201ENST00000330949 EFCAB1Q9HAE3 211 aa24.87■■□□□ 1.57
SOX1-201ENST00000330949 SCN4AP35499 1836 aa24.87■■□□□ 1.57
SOX1-201ENST00000330949 A0A1W2PPW3 197 aa24.86■■□□□ 1.57
SOX1-201ENST00000330949 CFAP99D6REC4 459 aa24.86■■□□□ 1.57
SOX1-201ENST00000330949 KCNN4O15554 427 aa24.86■■□□□ 1.57
SOX1-201ENST00000330949 ADSLP30566 484 aaPredicted RBP24.86■■□□□ 1.57
SOX1-201ENST00000330949 PPP6R3Q5H9R7 873 aaPredicted RBP24.86■■□□□ 1.57
SOX1-201ENST00000330949 CYS1Q717R9 158 aa24.86■■□□□ 1.57
SOX1-201ENST00000330949 ASB9Q96DX5 294 aa24.86■■□□□ 1.57
SOX1-201ENST00000330949 SIGLEC10Q96LC7 697 aa24.86■■□□□ 1.57
SOX1-201ENST00000330949 NTPCRQ9BSD7 190 aaKnown RBP24.86■■□□□ 1.57
SOX1-201ENST00000330949 SDCBP2Q9H190 292 aa24.86■■□□□ 1.57
SOX1-201ENST00000330949 COL11A2P13942 1736 aaPredicted RBP24.86■■□□□ 1.57
SOX1-201ENST00000330949 H0YIN7 160 aa24.86■■□□□ 1.57
SOX1-201ENST00000330949 GABRB3P28472 473 aa24.86■■□□□ 1.57
SOX1-201ENST00000330949 NEPROQ6NW34 567 aa24.86■■□□□ 1.57
SOX1-201ENST00000330949 MAPK15Q8TD08 544 aa24.86■■□□□ 1.57
SOX1-201ENST00000330949 TDRD1Q9BXT4 1180 aaKnown RBP24.86■■□□□ 1.57
SOX1-201ENST00000330949 UNKQ9C0B0 810 aaKnown RBP24.86■■□□□ 1.57
SOX1-201ENST00000330949 PCSK1NQ9UHG2 260 aa24.86■■□□□ 1.57
SOX1-201ENST00000330949 NUB1Q9Y5A7 615 aa24.86■■□□□ 1.57
SOX1-201ENST00000330949 SLC30A1Q9Y6M5 507 aa24.86■■□□□ 1.57
SOX1-201ENST00000330949 TMX2-CTNND1H3BSU7 103 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 ZBTB17Q13105 803 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 INAQ16352 499 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 TTC33Q6PID6 262 aaPredicted RBP24.85■■□□□ 1.57
SOX1-201ENST00000330949 C4orf19Q8IY42 314 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 LRTOMTQ8WZ04 291 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 RTP4Q96DX8 246 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 PDZD7Q9H5P4 517 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 MOCS1Q9NZB8 636 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 NCKIPSDQ9NZQ3 722 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 MRPL11Q9Y3B7 192 aaKnown RBP24.85■■□□□ 1.57
SOX1-201ENST00000330949 TRIM38O00635 465 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 TADA2AO75478 443 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 CSPG5O95196 566 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 DPP6P42658 865 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 MAGEA3P43357 314 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 TFDP2Q14188 446 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 HERC3Q15034 1050 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 UGCGQ16739 394 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 FAM47CQ5HY64 1035 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 FGD3Q5JSP0 725 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 MAMDC4Q6UXC1 1216 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 EEPD1Q7L9B9 569 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 CPNE9Q8IYJ1 553 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 ARHGAP28Q9P2N2 729 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 TMX2Q9Y320 296 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 DGKIO75912 1065 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 PRKCGP05129 697 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 CD1EP15812 388 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 POLR2BP30876 1174 aaKnown RBP24.85■■□□□ 1.57
SOX1-201ENST00000330949 AARS2Q5JTZ9 985 aaKnown RBP24.85■■□□□ 1.57
SOX1-201ENST00000330949 GPAT2Q6NUI2 795 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 ZNF786Q8N393 782 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 SLC29A1Q99808 456 aa24.85■■□□□ 1.57
SOX1-201ENST00000330949 EIF2S1P05198 315 aaKnown RBP24.84■■□□□ 1.57
SOX1-201ENST00000330949 BNIP3Q12983 259 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 SPP2Q13103 211 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 NHSL2Q5HYW2 709 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 KIAA0319LQ8IZA0 1049 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 NPLQ9BXD5 320 aaPredicted RBP24.84■■□□□ 1.57
SOX1-201ENST00000330949 MRPL40Q9NQ50 206 aaKnown RBP24.84■■□□□ 1.57
SOX1-201ENST00000330949 TMEM216Q9P0N5 145 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 SNX13Q9Y5W8 968 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 DHX15O43143 795 aaKnown RBP24.84■■□□□ 1.57
SOX1-201ENST00000330949 SNAP91O60641 907 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 CYP2C9P11712 490 aa24.84■■□□□ 1.57
SOX1-201ENST00000330949 TCN1P20061 433 aaPredicted RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms