RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 DRG1Q9Y295 367 aaKnown RBP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 E2F8A0AVK6 867 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 LRRD1A4D1F6 860 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 MAN2B1O00754 1011 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 GAS8O95995 478 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 F9P00740 461 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 CYP17A1P05093 508 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 FYNP06241 537 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 HMBSP08397 361 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 RALAP11233 206 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 KDELR1P24390 212 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 CDKN2BP42772 138 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 ZNF135P52742 658 aaPredicted RBP16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 GUCY2DQ02846 1103 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 EFEMP1Q12805 493 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 TFDP2Q14188 446 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 FSTL4Q6MZW2 842 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 Q6ZS52 159 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 ZNF276Q8N554 614 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 ARFGAP1Q8N6T3 406 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 KCTD6Q8NC69 237 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 PIWIL1Q96J94 861 aaKnown RBP16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 ERP44Q9BS26 406 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 OSBPL6Q9BZF3 934 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 NACA2Q9H009 215 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 VIPAS39Q9H9C1 493 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 EPB41L5Q9HCM4 733 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 FAM86C1Q9NVL1 165 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 POLR3BQ9NW08 1133 aaPredicted RBP16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 AMACRQ9UHK6 382 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 DNMT3LQ9UJW3 386 aa16.98■□□□□ 0.31
PDLIM1-201ENST00000329399 GPR179Q6PRD1 2367 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 RIF1Q5UIP0 2472 aaKnown RBP16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 hCG_1818297A0A087WSY0 165 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 ZNF189O75820 626 aaPredicted RBP16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 SLC6A11P48066 632 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 MTAPQ13126 283 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 DHCR24Q15392 516 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 PKN3Q6P5Z2 889 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 KLHDC10Q6PID8 442 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 C12orf40Q86WS4 652 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 TMEM25Q86YD3 366 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 FAM71BQ8TC56 605 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 FAM172AQ8WUF8 416 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 CAVIN3Q969G5 261 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 PGAP3Q96FM1 320 aaPredicted RBP16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 NELL2Q99435 816 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 DCLK3Q9C098 648 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 RCOR3Q9P2K3 495 aaPredicted RBP16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 SFMBT1Q9UHJ3 866 aa16.97■□□□□ 0.31
PDLIM1-201ENST00000329399 MIA3Q5JRA6 1907 aa16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 STC2O76061 302 aa16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 ECEL1O95672 775 aa16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 ZFXP17010 805 aaPredicted RBP16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 OPRD1P41143 372 aa16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 CCINQ13939 588 aa16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 TAF5Q15542 800 aa16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 LY6G5CQ5SRR4 150 aa16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 ERMARDQ5T6L9 678 aa16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 AADACL2Q6P093 401 aa16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 MFSD7Q6UXD7 560 aa16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 BBS12Q6ZW61 710 aa16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 HTR3DQ70Z44 454 aa16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 ATP2A3Q93084 1043 aa16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 RNF25Q96BH1 459 aaPredicted RBP16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 MAK16Q9BXY0 300 aaKnown RBP16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 TSPYL1Q9H0U9 437 aa16.96■□□□□ 0.31
PDLIM1-201ENST00000329399 C3orf70A6NLC5 250 aaPredicted RBP16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 TRDMT1O14717 391 aaKnown RBP16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 TRIM24O15164 1050 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 EGFP01133 1207 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 PSEN1P49768 467 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 SLC7A5Q01650 507 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 NHLH1Q02575 133 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 GPS2Q13227 327 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 ANGPT1Q15389 498 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 TMEM196Q5HYL7 178 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 Q6ZNB5 142 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 BNIPLQ7Z465 357 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 JAMLQ86YT9 394 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 C1orf210Q8IVY1 113 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 ARHGAP18Q8N392 663 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 CPA6Q8N4T0 437 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 BBOF1Q8ND07 529 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 AENQ8WTP8 325 aaKnown RBP16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 FAM149B1Q96BN6 582 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 CFAP57Q96MR6 1250 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 NPY6RQ99463 290 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 ZNF670Q9BS34 389 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 ZWILCHQ9H900 591 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 MARCH2Q9P0N8 246 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 MRPS17Q9Y2R5 130 aaKnown RBP16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 SH3BP1Q9Y3L3 701 aa16.95■□□□□ 0.3
PDLIM1-201ENST00000329399 CAPN9O14815 690 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 MSI1O43347 362 aaKnown RBP16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 LTFP02788 710 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 IL1R2P27930 398 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 GJC1P36383 396 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 PTGIRP43119 386 aa16.94■□□□□ 0.3
PDLIM1-201ENST00000329399 RPS9P46781 194 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms