RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ADGRA2Q96PE1 1338 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 DOCK5Q9H7D0 1870 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 LY75O60449 1722 aa13.08□□□□□ -0.32
CCDC60-201ENST00000327554 CSPG5O95196 566 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 ZBTB11O95625 1053 aaPredicted RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 TPSB2P20231 275 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 MX2P20592 715 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 FGFR3P22607 806 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 YWHAEP62258 255 aaKnown RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 RFTN1Q14699 578 aaPredicted RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 TPSAB1Q15661 275 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 LSM12Q3MHD2 195 aaKnown RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 SEZ6Q53EL9 994 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 SH3PXD2AQ5TCZ1 1133 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 CPSF7Q8N684 471 aaKnown RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 TDRD5Q8NAT2 981 aaKnown RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 AGR3Q8TD06 166 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 MASTLQ96GX5 879 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 GPATCH1Q9BRR8 931 aaKnown RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 ZC3H12CQ9C0D7 883 aaKnown RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 POLR3FQ9H1D9 316 aaPredicted RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 ANLNQ9NQW6 1124 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 SPATA7Q9P0W8 599 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 E2F8A0AVK6 867 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 HTRA2O43464 458 aaPredicted RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 NPM3O75607 178 aaKnown RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 STAMBPO95630 424 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 IL4RP24394 825 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 C21orf59P57076 290 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 MYL6P60660 151 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 BCL2A1Q16548 175 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 ILDR2Q71H61 639 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 TNS4Q8IZW8 715 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 DDHD1Q8NEL9 900 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 MCPH1Q8NEM0 835 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 DEPTORQ8TB45 409 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 ADAMTS16Q8TE57 1224 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 CHPT1Q8WUD6 406 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 CLEC4DQ8WXI8 215 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 NIF3L1Q9GZT8 377 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 RPF2Q9H7B2 306 aaKnown RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 DUS2Q9NX74 493 aaKnown RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 TUBA8Q9NY65 449 aaPredicted RBP13.07□□□□□ -0.32
CCDC60-201ENST00000327554 AP4S1Q9Y587 144 aa13.07□□□□□ -0.32
CCDC60-201ENST00000327554 WDR27A2RRH5 827 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 C9IYK1 514 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 NEMP1O14524 444 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 SLC22A2O15244 555 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 VAPBO95292 243 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 HMGCRP04035 888 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 TCN1P20061 433 aaPredicted RBP13.06□□□□□ -0.32
CCDC60-201ENST00000327554 CD247P20963 164 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 ESRRGP62508 458 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 KRT76Q01546 638 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 MTX3Q5HYI7 312 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 XKR5Q6UX68 686 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 PTAR1Q7Z6K3 402 aaPredicted RBP13.06□□□□□ -0.32
CCDC60-201ENST00000327554 SETD3Q86TU7 594 aaPredicted RBP13.06□□□□□ -0.32
CCDC60-201ENST00000327554 THAP11Q96EK4 314 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 DOK1Q99704 481 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 MSTO1Q9BUK6 570 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 LHX5Q9H2C1 402 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 TCEAL9Q9UHQ7 104 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 IPO11Q9UI26 975 aaKnown RBP13.06□□□□□ -0.32
CCDC60-201ENST00000327554 FAM32AQ9Y421 112 aaKnown RBP13.06□□□□□ -0.32
CCDC60-201ENST00000327554 A0A087WXM4 84 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 TMEM114B3SHH9 223 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 G3V2L1 256 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 H3BMQ9 156 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 TRIM38O00635 465 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 DGAT1O75907 488 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 BAIAP3O94812 1187 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 EDN1P05305 212 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 HERC3Q15034 1050 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 STILQ15468 1287 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 CCDC153Q494R4 210 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 NHSL2Q5HYW2 709 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 SLC9A4Q6AI14 798 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 SCARA5Q6ZMJ2 495 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 SP8Q8IXZ3 490 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 PLD6Q8N2A8 252 aaKnown RBP13.06□□□□□ -0.32
CCDC60-201ENST00000327554 FAM47BQ8NA70 645 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 RNF169Q8NCN4 708 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 SLCO4A1Q96BD0 722 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 COG8Q96MW5 612 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 MPHOSPH6Q99547 160 aaKnown RBP13.06□□□□□ -0.32
CCDC60-201ENST00000327554 GABBR1Q9UBS5 961 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 CCPG1Q9ULG6 757 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 KIAA1217Q5T5P2 1943 aa13.06□□□□□ -0.32
CCDC60-201ENST00000327554 H0YCG3 227 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 TADA2AO75478 443 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 PIGRP01833 764 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 UGT1A6P19224 532 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 TGM2P21980 687 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 UGT1A1P22309 533 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 UGT1A4P22310 534 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 MPSTP25325 297 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 UGT1A3P35503 534 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 UGT1A5P35504 534 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms