RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 TEX264Q9Y6I9 313 aa18.91■□□□□ 0.62
USP39-201ENST00000323701 DOCK4Q8N1I0 1966 aa18.9■□□□□ 0.62
USP39-201ENST00000323701 C2orf78A6NCI8 922 aa18.9■□□□□ 0.62
USP39-201ENST00000323701 PRRG1O14668 218 aa18.9■□□□□ 0.62
USP39-201ENST00000323701 NDC80O14777 642 aa18.9■□□□□ 0.62
USP39-201ENST00000323701 CA8P35219 290 aa18.9■□□□□ 0.62
USP39-201ENST00000323701 SERPINB6P35237 376 aa18.9■□□□□ 0.62
USP39-201ENST00000323701 NRG1Q02297 640 aaPredicted RBP18.9■□□□□ 0.62
USP39-201ENST00000323701 EFTUD2Q15029 972 aaKnown RBP eCLIP18.9■□□□□ 0.623e-8■■□□□ 13.7
USP39-201ENST00000323701 FBXL22Q6P050 247 aa18.9■□□□□ 0.62
USP39-201ENST00000323701 MPP5Q8N3R9 675 aa18.9■□□□□ 0.62
USP39-201ENST00000323701 BTN2A3PQ96KV6 586 aa18.9■□□□□ 0.62
USP39-201ENST00000323701 AGAP3Q96P47 875 aa18.9■□□□□ 0.62
USP39-201ENST00000323701 PRMT1Q99873 361 aaKnown RBP18.9■□□□□ 0.62
USP39-201ENST00000323701 PRKAG2Q9UGJ0 569 aa18.9■□□□□ 0.62
USP39-201ENST00000323701 RAD54BQ9Y620 910 aa18.9■□□□□ 0.62
USP39-201ENST00000323701 NYNRINQ9P2P1 1898 aaKnown RBP18.9■□□□□ 0.62
USP39-201ENST00000323701 ZBTB24O43167 697 aaPredicted RBP18.89■□□□□ 0.62
USP39-201ENST00000323701 OPHN1O60890 802 aa18.89■□□□□ 0.62
USP39-201ENST00000323701 APOEP02649 317 aa18.89■□□□□ 0.62
USP39-201ENST00000323701 ABHD2P08910 425 aa18.89■□□□□ 0.62
USP39-201ENST00000323701 SLC2A3P11169 496 aa18.89■□□□□ 0.62
USP39-201ENST00000323701 PPM1AP35813 382 aa18.89■□□□□ 0.62
USP39-201ENST00000323701 ALDH1A3P47895 512 aa18.89■□□□□ 0.62
USP39-201ENST00000323701 NUMBP49757 651 aa18.89■□□□□ 0.62
USP39-201ENST00000323701 SNX30Q5VWJ9 437 aa18.89■□□□□ 0.62
USP39-201ENST00000323701 PID1Q7Z2X4 250 aa18.89■□□□□ 0.62
USP39-201ENST00000323701 RTL3Q8N8U3 475 aaKnown RBP18.89■□□□□ 0.62
USP39-201ENST00000323701 WBP2Q969T9 261 aa18.89■□□□□ 0.62
USP39-201ENST00000323701 EXOC4Q96A65 974 aa18.89■□□□□ 0.62
USP39-201ENST00000323701 MYRFLQ96LU7 910 aa18.89■□□□□ 0.62
USP39-201ENST00000323701 ZNF334Q9HCZ1 680 aaPredicted RBP18.89■□□□□ 0.62
USP39-201ENST00000323701 ALG13Q9NP73 1137 aaKnown RBP18.89■□□□□ 0.62
USP39-201ENST00000323701 GKN1Q9NS71 199 aa18.89■□□□□ 0.62
USP39-201ENST00000323701 TBK1Q9UHD2 729 aa18.89■□□□□ 0.62
USP39-201ENST00000323701 CEP290O15078 2479 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 TRANK1O15050 2925 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 SMAPO00193 183 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 NCAM2O15394 837 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 RGS16O15492 202 aaPredicted RBP18.89■□□□□ 0.61
USP39-201ENST00000323701 CREB1P16220 341 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 MAGEA3P43357 314 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 SPARCL1Q14515 664 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 C6orf118Q5T5N4 469 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 AFMIDQ63HM1 303 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 C3orf62Q6ZUJ4 267 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 DNAJB7Q7Z6W7 309 aaPredicted RBP18.89■□□□□ 0.61
USP39-201ENST00000323701 HERC6Q8IVU3 1022 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 TCEAL8Q8IYN2 117 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 CNTD1Q8N815 330 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 ROPN1BQ9BZX4 212 aaPredicted RBP18.89■□□□□ 0.61
USP39-201ENST00000323701 PHACTR1Q9C0D0 580 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 ROPN1Q9HAT0 212 aaPredicted RBP18.89■□□□□ 0.61
USP39-201ENST00000323701 EURLQ9NYK6 297 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 HSFX1Q9UBD0 423 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 INSL6Q9Y581 213 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 INSL5Q9Y5Q6 135 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 REV3LO60673 3130 aa18.89■□□□□ 0.61
USP39-201ENST00000323701 PDE4DIPQ5VU43 2346 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 NRG2O14511 850 aaPredicted RBP18.88■□□□□ 0.61
USP39-201ENST00000323701 FGF10O15520 208 aaPredicted RBP18.88■□□□□ 0.61
USP39-201ENST00000323701 TGM5O43548 720 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 MAFKO60675 156 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 TCEA3O75764 348 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 ARHGEF15O94989 841 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 JCHAINP01591 159 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 CSH1P0DML2 217 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 CSH2P0DML3 217 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 CTSAP10619 480 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 TPSB2P20231 275 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 ERVFC1P60507 584 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 TPSAB1Q15661 275 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 KDM7AQ6ZMT4 941 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 CEP128Q6ZU80 1094 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.88■□□□□ 0.61
USP39-201ENST00000323701 USP33Q8TEY7 942 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 MRRFQ96E11 262 aaKnown RBP18.88■□□□□ 0.61
USP39-201ENST00000323701 TTC25Q96NG3 672 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 CATSPERBQ9H7T0 1116 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 KLHL8Q9P2G9 620 aaPredicted RBP18.88■□□□□ 0.61
USP39-201ENST00000323701 ZNF212Q9UDV6 495 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 RABGEF1Q9UJ41 708 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 DNMT3LQ9UJW3 386 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 ANAPC1Q9H1A4 1944 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 IGLV3-10A0A075B6K4 115 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 A0A087WUV0 522 aaPredicted RBP18.88■□□□□ 0.61
USP39-201ENST00000323701 E7EVH7 732 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 EIF3HO15372 352 aaKnown RBP eCLIP18.88■□□□□ 0.61
USP39-201ENST00000323701 KLKB1P03952 638 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 MX2P20592 715 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 DNAJB1P25685 340 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 ATP5C1P36542 298 aaKnown RBP18.88■□□□□ 0.61
USP39-201ENST00000323701 LMAN1P49257 510 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 RING1Q06587 406 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 EMC10Q5UCC4 262 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 RFWD3Q6PCD5 774 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 C4orf22Q6V702 233 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 ATP6V0D2Q8N8Y2 350 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 MCUQ8NE86 351 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 CEP295NLQ96MC4 621 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms