RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 PAFAH2Q99487 392 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 FRMD8P1Q9BZ68 369 aaPredicted RBP9.35□□□□□ -0.91
CD46-202ENST00000322918 SHROOM3Q8TF72 1996 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 CXorf49A8MYA2 514 aaPredicted RBP9.35□□□□□ -0.91
CD46-202ENST00000322918 HOXA2O43364 376 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 TSPAN3O60637 253 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 CDH16O75309 829 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 DGKIO75912 1065 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 GJB5O95377 273 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 AGTP01019 485 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 NFKB1P19838 968 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 MSH2P43246 934 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 CLNS1AP54105 237 aaKnown RBP9.35□□□□□ -0.91
CD46-202ENST00000322918 SARNPP82979 210 aaKnown RBP9.35□□□□□ -0.91
CD46-202ENST00000322918 GPR17Q13304 367 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 E2F5Q15329 346 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 ALFQ53S48 1182 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 PIK3R6Q5UE93 754 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 TLCD1Q96CP7 247 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 VWCEQ96DN2 955 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 MYEOVQ96EZ4 313 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 PGM2Q96G03 612 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 FERMT1Q9BQL6 677 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 ELAC1Q9H777 363 aaKnown RBP9.35□□□□□ -0.91
CD46-202ENST00000322918 TBX21Q9UL17 535 aa9.35□□□□□ -0.91
CD46-202ENST00000322918 E9PAM4 449 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 PMPCBO75439 489 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 PTPN3P26045 913 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 GCAP28676 217 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 IRX4P78413 519 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 STAT4Q14765 748 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 WLSQ5T9L3 541 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 VSTM1Q6UX27 236 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 FAM43BQ6ZT52 329 aaPredicted RBP9.34□□□□□ -0.91
CD46-202ENST00000322918 TAOK1Q7L7X3 1001 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 SPRED2Q7Z698 418 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 CPLX4Q7Z7G2 160 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 CHSY1Q86X52 802 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 ATPAF2Q8N5M1 289 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 OLFM3Q96PB7 478 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 SLC39A8Q9C0K1 460 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 FBXO44Q9H4M3 255 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 C11orf49Q9H6J7 331 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 SLC12A6Q9UHW9 1150 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 GGT7Q9UJ14 662 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 RABGEF1Q9UJ41 708 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 ACTL7AQ9Y615 435 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 REV3LO60673 3130 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 VWA8A3KMH1 1905 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 CFAP69A5D8W1 941 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 ARHGAP42A6NI28 874 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 OR6C75A6NL08 312 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 APOEP02649 317 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 RPSAP08865 295 aaKnown RBP9.34□□□□□ -0.91
CD46-202ENST00000322918 GJA1P17302 382 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 KRT4P19013 534 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 CALRP27797 417 aaKnown RBP9.34□□□□□ -0.91
CD46-202ENST00000322918 PHBP35232 272 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 GMPRP36959 345 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 CRYMQ14894 314 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 QPCTQ16769 361 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 RNF135Q8IUD6 432 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 PNPLA1Q8N8W4 532 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 IPMKQ8NFU5 416 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 IRGQQ8WZA9 623 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 CLSTN3Q9BQT9 956 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 CWH43Q9H720 699 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 SLC40A1Q9NP59 571 aa9.34□□□□□ -0.91
CD46-202ENST00000322918 TLR8Q9NR97 1041 aaKnown RBP9.34□□□□□ -0.91
CD46-202ENST00000322918 SLC38A8A6NNN8 435 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 TMEM189-UBE2V1I3L0A0 370 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 CHADO15335 359 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 INPPL1O15357 1258 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 RASSF9O75901 435 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 INHBAP08476 426 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 ATP2A2P16615 1042 aaKnown RBP9.34□□□□□ -0.92
CD46-202ENST00000322918 EN2P19622 333 aaPredicted RBP9.34□□□□□ -0.92
CD46-202ENST00000322918 CA4P22748 312 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 GARSP41250 739 aaKnown RBP9.34□□□□□ -0.92
CD46-202ENST00000322918 CCNHP51946 323 aaPredicted RBP9.34□□□□□ -0.92
CD46-202ENST00000322918 IFT88Q13099 833 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 MROH9Q5TGP6 573 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 CNKSR3Q6P9H4 555 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 FAM47EQ6ZV65 393 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 PDZD4Q76G19 769 aaPredicted RBP9.34□□□□□ -0.92
CD46-202ENST00000322918 BZW1Q7L1Q6 419 aaKnown RBP9.34□□□□□ -0.92
CD46-202ENST00000322918 DENND1CQ8IV53 801 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 ST13P5Q8NFI4 369 aaPredicted RBP9.34□□□□□ -0.92
CD46-202ENST00000322918 NTAN1Q96AB6 310 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 TTC25Q96NG3 672 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 ZNF558Q96NG5 402 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 SERPINB11Q96P15 392 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 TMEM106CQ9BVX2 250 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 SLC13A1Q9BZW2 595 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 SMOC2Q9H3U7 446 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 TRABDQ9H4I3 376 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 CXXC1Q9P0U4 656 aaPredicted RBP9.34□□□□□ -0.92
CD46-202ENST00000322918 SCML2Q9UQR0 700 aa9.34□□□□□ -0.92
CD46-202ENST00000322918 C2orf78A6NCI8 922 aa9.33□□□□□ -0.92
CD46-202ENST00000322918 KCNU1A8MYU2 1149 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms