RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CARM1Q86X55 608 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 PSTKQ8IV42 348 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ZFPM1Q8IX07 1006 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 PHTF2Q8N3S3 785 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 OR5B17Q8NGF7 314 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 EFHD2Q96C19 240 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 C9orf16Q9BUW7 83 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF395Q9H8N7 513 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 NMRAL1Q9HBL8 299 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 MAGEE1Q9HCI5 957 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 PCDHAC2Q9Y5I4 1007 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 TESPA1A2RU30 521 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 HMX2A2RU54 273 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 XPO1O14980 1071 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ENTPD1P49961 510 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 C1QTNF12Q5T7M4 302 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 SH3BP5LQ7L8J4 393 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 GPR180Q86V85 440 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 SFRP1Q8N474 314 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 TDRD5Q8NAT2 981 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 PCYOX1LQ8NBM8 494 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 HSPH1Q92598 858 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 HNRNPABQ99729 332 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 TDRD1Q9BXT4 1180 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 MRPL4Q9BYD3 311 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 PAIP1Q9H074 479 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 TRPV6Q9H1D0 765 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 C2orf40Q9H1Z8 148 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 MUC13Q9H3R2 512 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 SMYD2Q9NRG4 433 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ARHGEF38Q9NXL2 777 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 TUBGCP4Q9UGJ1 667 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 GPC6Q9Y625 555 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ANKRD36CQ5JPF3 1778 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 TPP1O14773 563 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 TFEBP19484 476 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 HALP42357 657 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 BCAP31P51572 246 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 STX1BP61266 288 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 FSTL1Q12841 308 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 GRSF1Q12849 480 aaKnown RBP eCLIP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 PGM5Q15124 567 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 NDUFA5Q16718 116 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 PRMT9Q6P2P2 845 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 TRMT10BQ6PF06 316 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 RSPH3Q86UC2 560 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 CASP10Q92851 521 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 SLC45A3Q96JT2 553 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 GPATCH1Q9BRR8 931 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 BRD8Q9H0E9 1235 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 JPH1Q9HDC5 661 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 NCKIPSDQ9NZQ3 722 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 HESX1Q9UBX0 185 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 SNX13Q9Y5W8 968 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 CNTNAP2Q9UHC6 1331 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 A0A096LPK6 155 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 RNF103-CHMP3A0A140T963 221 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 C2CD4BA6NLJ0 364 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF839A8K0R7 811 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ZBTB14O43829 449 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 IL18RAPO95256 599 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 MYL3P08590 195 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 CCND2P30279 289 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 MRPS9P82933 396 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 PRKCEQ02156 737 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 EPS8Q12929 822 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 BNIP2Q12982 314 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 MTM1Q13496 603 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 INAQ16352 499 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 TRIM16LQ309B1 348 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 MGAT5BQ3V5L5 792 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 SH3D19Q5HYK7 790 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 INTS11Q5TA45 600 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 XYLT1Q86Y38 959 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ARFGAP1Q8N6T3 406 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 EMC1Q8N766 993 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ANKFN1Q8N957 763 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ANKRD52Q8NB46 1076 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ACER1Q8TDN7 264 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 RCN3Q96D15 328 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 CCDC126Q96EE4 140 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 PLEKHA8Q96JA3 519 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 HEY1Q9Y5J3 304 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 HTR3EA5X5Y0 456 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 PSMD12O00232 456 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 VAPBO95292 243 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 GSRP00390 522 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 CALCAP01258 141 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 CFHP08603 1231 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 RPS6P62753 249 aaKnown RBP4.88□□□□□ -1.63
PTPN13-201ENST00000316707 PDK1Q15118 436 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 KYAT1Q16773 422 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 GLRA4Q5JXX5 417 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ARHGEF16Q5VV41 709 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 ERO1BQ86YB8 467 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 C10orf107Q8IVU9 208 aa4.88□□□□□ -1.63
PTPN13-201ENST00000316707 FIBCD1Q8N539 461 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms