RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 FBXO47Q5MNV8 452 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 DENND5BQ6ZUT9 1274 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 LCA5Q86VQ0 697 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 NDUFAF2Q8N183 169 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 PPP1R14CQ8TAE6 165 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 XAB2Q9HCS7 855 aaKnown RBP17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 FAM105AQ9NUU6 356 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 PADI3Q9ULW8 664 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 NOD1Q9Y239 953 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 KPNA7A9QM74 516 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 PENKP01210 267 aaPredicted RBP17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 BPGMP07738 259 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 KRT3P12035 628 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 YWHAZP63104 245 aaKnown RBP17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 ROR1Q01973 937 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 WASHC5Q12768 1159 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 LGSNQ5TDP6 509 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 RSPH3Q86UC2 560 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 TRPV6Q9H1D0 765 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 LHX5Q9H2C1 402 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 SMYD2Q9NRG4 433 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 RAB6BQ9NRW1 208 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 GALNT8Q9NY28 637 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 ZC3H7BQ9UGR2 993 aaKnown RBP17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 DERAQ9Y315 318 aa17.64■□□□□ 0.41
SCAMP4-201ENST00000316097 SMIM31A0A1B0GVY4 71 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 HMGCRP04035 888 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 PFKMP08237 780 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 VDRP11473 427 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 APLP1P51693 650 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 ACLYP53396 1101 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 INHBCP55103 352 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 SH3BGRP55822 239 aaPredicted RBP17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 USP46P62068 366 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 RAB6CQ53S08 254 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 FAXCQ5TGI0 409 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 PAAF1Q9BRP4 392 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 ZNF518BQ9C0D4 1074 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 RAB6CQ9H0N0 254 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 PNPLA8Q9NP80 782 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 CCNT2O60583 730 aaKnown RBP17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 LYPLA1O75608 230 aaPredicted RBP17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 PROCP04070 461 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 ASLP04424 464 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 PIM1P11309 404 aaPredicted RBP17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 CHN2P52757 468 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 CDK18Q07002 472 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 GOLGA7BQ2TAP0 167 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 GRAMD1BQ3KR37 738 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 MROH9Q5TGP6 573 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 FBXL19Q6PCT2 694 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 ISLR2Q6UXK2 745 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 XYLT1Q86Y38 959 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 EFCAB3Q8N7B9 438 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 KBTBD7Q8WVZ9 684 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 ZNF180Q9UJW8 692 aa17.63■□□□□ 0.41
SCAMP4-201ENST00000316097 ATP5BP06576 529 aaKnown RBP17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 CSH1P0DML2 217 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 CSH2P0DML3 217 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 CCDC130P13994 396 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 RAG1P15918 1043 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 COPAP53621 1224 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 MGAT3Q09327 533 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 TAZQ16635 292 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 ANKRD20A4Q4UJ75 823 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 TTC30AQ86WT1 665 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 WDR75Q8IWA0 830 aaKnown RBP17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 DNAJC16Q9Y2G8 782 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 TIMM13Q9Y5L4 95 aaPredicted RBP17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 C15orf38-AP3S2A0A0A6YYH1 394 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 KCNE1P15382 129 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 ACAT1P24752 427 aaKnown RBP17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 MMRN1Q13201 1228 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 MYBPC3Q14896 1274 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 XKR4Q5GH76 650 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 MAP3K21Q5TCX8 1036 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 SH3PXD2AQ5TCZ1 1133 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 PMF1Q6P1K2 205 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 ARPINQ7Z6K5 226 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 DNAJC1Q96KC8 554 aaKnown RBP17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 TRIM56Q9BRZ2 755 aaKnown RBP17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 POPDC2Q9HBU9 364 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 THAP1Q9NVV9 213 aa17.62■□□□□ 0.41
SCAMP4-201ENST00000316097 HNRNPRO43390 633 aaKnown RBP17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 ITM2AO43736 263 aa17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 KRT38O76015 456 aa17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 STAU1O95793 577 aaKnown RBP17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 INHAP05111 366 aa17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 ADORA2BP29275 332 aa17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 LILRA4P59901 499 aa17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 TUBB3Q13509 450 aa17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 TCHHL1Q5QJ38 904 aaPredicted RBP17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 UGT2A3Q6UWM9 527 aa17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 LRRC52Q8N7C0 313 aa17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 ZNF296Q8WUU4 475 aaPredicted RBP17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 ZNF778Q96MU6 729 aa17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 B3GNT5Q9BYG0 378 aa17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 PLAC1Q9HBJ0 212 aa17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 CDH22Q9UJ99 828 aa17.61■□□□□ 0.41
SCAMP4-201ENST00000316097 SORCS3Q9UPU3 1222 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms