RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 KIAA0895LQ68EN5 471 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 LRSAM1Q6UWE0 723 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 BEND5Q7L4P6 421 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 MARCH9Q86YJ5 346 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 APCDD1Q8J025 514 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 LGI2Q8N0V4 545 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 STK32AQ8WU08 396 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 ZNF606Q8WXB4 792 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 FAM129BQ96TA1 746 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 CDC6Q99741 560 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 SRRTQ9BXP5 876 aaKnown RBP18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 NEUROG2Q9H2A3 272 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 EBF2Q9HAK2 575 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 NCKAP1Q9Y2A7 1128 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 BPTFQ12830 3046 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 ARID1BQ8NFD5 2236 aaPredicted RBP18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 ADAMTS20P59510 1910 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 A0A1W2PP55 124 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 BICDL2A1A5D9 508 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 GOLGA8CPA6NN73 597 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 E5RJQ4 531 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 SART1O43290 800 aaKnown RBP18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 GADD45BO75293 160 aaPredicted RBP18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 LETM1O95202 739 aaPredicted RBP18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 IGLV3-25P01717 112 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 CTSKP43235 329 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 EIF4EBP2Q13542 120 aaPredicted RBP18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 SUZ12Q15022 739 aaKnown RBP18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 TAF5Q15542 800 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 CST6Q15828 149 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 RAP1GAP2Q684P5 730 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 NCEH1Q6PIU2 408 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 TMPRSS7Q7RTY8 843 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 TMEM110Q86TL2 294 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 MMAAQ8IVH4 418 aaKnown RBP18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 KDM1BQ8NB78 822 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 IGSF8Q969P0 613 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 RPL10LQ96L21 214 aaKnown RBP18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 TJP2Q9UDY2 1190 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 SCML1Q9UN30 329 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 LHX6Q9UPM6 363 aa18.06■□□□□ 0.48
EXOSC4-201ENST00000316052 SMG1Q96Q15 3661 aaKnown RBP18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 TARSL2A2RTX5 802 aaKnown RBP18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 TYW5A2RUC4 315 aaKnown RBP18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 C10orf142B7Z368 130 aa18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 CAPN9O14815 690 aa18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 PCDHGA12O60330 932 aa18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 RNASEH1O60930 286 aaKnown RBP18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 GNA14O95837 355 aa18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 TRUB2O95900 331 aaKnown RBP18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 SRPRAP08240 638 aaKnown RBP18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 TACR2P21452 398 aa18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 NUMBP49757 651 aa18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 ECT2LQ008S8 904 aa18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 IL9RQ01113 521 aa18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 KCNJ12Q14500 433 aa18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 PRAMEF14Q5SWL7 426 aa18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 GJB7Q6PEY0 223 aa18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 SLC6A18Q96N87 628 aa18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 CRACR2AQ9BSW2 395 aa18.05■□□□□ 0.48
EXOSC4-201ENST00000316052 ITIH6Q6UXX5 1313 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 A0A1W2PPC4 97 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 WNT9AO14904 365 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 VILLO15195 856 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 RNASEH2AO75792 299 aaKnown RBP18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 APOEP02649 317 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 WNT1P04628 370 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 SLC8A1P32418 973 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 STK19P49842 368 aaPredicted RBP18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 YWHAZP63104 245 aaKnown RBP18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 RACK1P63244 317 aaKnown RBP18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 PAK1Q13153 545 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 MEA1Q16626 185 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 ADAT2Q7Z6V5 191 aaKnown RBP18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 CHSY1Q86X52 802 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 CCDC117Q8IWD4 279 aaPredicted RBP18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 STK40Q8N2I9 435 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 WDTC1Q8N5D0 677 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 AADATQ8N5Z0 425 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 MDM1Q8TC05 714 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 PTPRN2Q92932 1015 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 BTN2A3PQ96KV6 586 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 PRMT1Q99873 361 aaKnown RBP18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 THAP9Q9H5L6 903 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 CCDC86Q9H6F5 360 aaKnown RBP18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 POPDC2Q9HBU9 364 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 ADAMTS1Q9UHI8 967 aa18.04■□□□□ 0.48
EXOSC4-201ENST00000316052 EDDM13A0A1B0GTR0 161 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 BECN2A8MW95 431 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 KCNU1A8MYU2 1149 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 THAP12O43422 761 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 MED7O43513 233 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 MOCS3O95396 460 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 VAV1P15498 845 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 GNA15P30679 374 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 GRK6P43250 576 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 PSMD8P48556 350 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 CCT8P50990 548 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 APBA1Q02410 837 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms