RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 NCKAP1Q9Y2A7 1128 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 TLR6Q9Y2C9 796 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 ACACAQ13085 2346 aa8.45□□□□□ -1.06
TPM3-203ENST00000312970 CKAP5Q14008 2032 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 CAPN9O14815 690 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 RNASEH1O60930 286 aaKnown RBP8.44□□□□□ -1.06
TPM3-203ENST00000312970 LETM1O95202 739 aaPredicted RBP8.44□□□□□ -1.06
TPM3-203ENST00000312970 CER1O95813 267 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 ASLP04424 464 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 ZNF883P0CG24 379 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 MATKP42679 507 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 CSNK1EP49674 416 aaKnown RBP8.44□□□□□ -1.06
TPM3-203ENST00000312970 AFF3P51826 1226 aaKnown RBP8.44□□□□□ -1.06
TPM3-203ENST00000312970 YWHAZP63104 245 aaKnown RBP8.44□□□□□ -1.06
TPM3-203ENST00000312970 SFSWAPQ12872 951 aaKnown RBP8.44□□□□□ -1.06
TPM3-203ENST00000312970 NNTQ13423 1086 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 TEAD4Q15561 434 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 MEA1Q16626 185 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 HLA-BQ31612 363 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 TTC31Q49AM3 519 aaPredicted RBP8.44□□□□□ -1.06
TPM3-203ENST00000312970 MS4A13Q5J8X5 152 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 SYPL2Q5VXT5 272 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 NADSYN1Q6IA69 706 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 DENND1BQ6P3S1 775 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 DBX2Q6ZNG2 339 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 ENOSF1Q7L5Y1 443 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 RAB44Q7Z6P3 723 aaPredicted RBP8.44□□□□□ -1.06
TPM3-203ENST00000312970 TMEM110Q86TL2 294 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 CACUL1Q86Y37 369 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 NAXDQ8IW45 347 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 CARNMT1Q8N4J0 409 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 CHCHD4Q8N4Q1 142 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 KDM1BQ8NB78 822 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 WFDC5Q8TCV5 224 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 DQX1Q8TE96 717 aaKnown RBP8.44□□□□□ -1.06
TPM3-203ENST00000312970 SETD7Q8WTS6 366 aaKnown RBP8.44□□□□□ -1.06
TPM3-203ENST00000312970 SNX19Q92543 992 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 FAM149B1Q96BN6 582 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 SLC39A13Q96H72 371 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 LMLNQ96KR4 655 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 FCRL2Q96LA5 508 aaPredicted RBP8.44□□□□□ -1.06
TPM3-203ENST00000312970 FAM81BQ96LP2 452 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 MED15Q96RN5 788 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 SLC4A5Q9BY07 1137 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 INTS2Q9H0H0 1204 aaKnown RBP8.44□□□□□ -1.06
TPM3-203ENST00000312970 C6orf106Q9H6K1 298 aaPredicted RBP8.44□□□□□ -1.06
TPM3-203ENST00000312970 SGK2Q9HBY8 427 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 OSGEPQ9NPF4 335 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 TM7SF3Q9NS93 570 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 KLK13Q9UKR3 277 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 SCML1Q9UN30 329 aa8.44□□□□□ -1.06
TPM3-203ENST00000312970 A0A1B0GVT2 93 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 TARSL2A2RTX5 802 aaKnown RBP8.43□□□□□ -1.06
TPM3-203ENST00000312970 GADD45BO75293 160 aaPredicted RBP8.43□□□□□ -1.06
TPM3-203ENST00000312970 MOCS3O95396 460 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 SEMA4FO95754 770 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 APOEP02649 317 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 CAPNS1P04632 268 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 SRPRAP08240 638 aaKnown RBP8.43□□□□□ -1.06
TPM3-203ENST00000312970 CSKP41240 450 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 RPS24P62847 133 aaKnown RBP8.43□□□□□ -1.06
TPM3-203ENST00000312970 ECT2LQ008S8 904 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 BNC1Q01954 994 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 ARID5BQ14865 1188 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 SUZ12Q15022 739 aaKnown RBP8.43□□□□□ -1.06
TPM3-203ENST00000312970 HNRNPA1L2Q32P51 320 aaKnown RBP8.43□□□□□ -1.06
TPM3-203ENST00000312970 DCAF6Q58WW2 860 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 FSCBQ5H9T9 825 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 ZNF776Q68DI1 518 aaPredicted RBP8.43□□□□□ -1.06
TPM3-203ENST00000312970 C19orf48Q6RUI8 117 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 USP30Q70CQ3 517 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 GLRX5Q86SX6 157 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 CREBRFQ8IUR6 639 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 LGI2Q8N0V4 545 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 CFAP52Q8N1V2 620 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 ADAM32Q8TC27 787 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 GANCQ8TET4 914 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 BIRC7Q96CA5 298 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 MYO19Q96H55 970 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 RSPH9Q9H1X1 276 aaPredicted RBP8.43□□□□□ -1.06
TPM3-203ENST00000312970 THAP9Q9H5L6 903 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 IL21RQ9HBE5 538 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 POPDC2Q9HBU9 364 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.43□□□□□ -1.06
TPM3-203ENST00000312970 SLC12A6Q9UHW9 1150 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 PCOLCE2Q9UKZ9 415 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 INTS6Q9UL03 887 aaKnown RBP8.43□□□□□ -1.06
TPM3-203ENST00000312970 ERVW-1Q9UQF0 538 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 APOBEC2Q9Y235 224 aaKnown RBP8.43□□□□□ -1.06
TPM3-203ENST00000312970 ANKRD6Q9Y2G4 727 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.43□□□□□ -1.06
TPM3-203ENST00000312970 PCDHGB2Q9Y5G2 931 aa8.43□□□□□ -1.06
TPM3-203ENST00000312970 APC2O95996 2303 aa8.42□□□□□ -1.06
TPM3-203ENST00000312970 KCNU1A8MYU2 1149 aa8.42□□□□□ -1.06
TPM3-203ENST00000312970 E5RJQ4 531 aa8.42□□□□□ -1.06
TPM3-203ENST00000312970 PAPSS1O43252 624 aaPredicted RBP8.42□□□□□ -1.06
TPM3-203ENST00000312970 THAP12O43422 761 aa8.42□□□□□ -1.06
TPM3-203ENST00000312970 CBFA2T3O75081 653 aa8.42□□□□□ -1.06
TPM3-203ENST00000312970 SIN3BO75182 1162 aa8.42□□□□□ -1.06
TPM3-203ENST00000312970 FSBPO95073 299 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms