RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ACAP1Q15027 740 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 NEDD8Q15843 81 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 PACS1Q6VY07 963 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 LRRC17Q8N6Y2 441 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 CASKIN2Q8WXE0 1202 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 PLA2G12BQ9BX93 195 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 C1QTNF1Q9BXJ1 281 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 CETPP11597 493 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 QPRTQ15274 297 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 TMEM63BQ5T3F8 832 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 ABRAXAS1Q6UWZ7 409 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 SCAIQ8N9R8 606 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 TRIM39Q9HCM9 518 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 KCNK4Q9NYG8 393 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 CLTCQ00610 1675 aaKnown RBP15.77■□□□□ 0.12
HCFC1-201ENST00000310441 MYO5BQ9ULV0 1848 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 MYMKA6NI61 221 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 ALOX5P09917 674 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 TRIM32Q13049 653 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 SGCGQ13326 291 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 PTPAQ15257 358 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 OR2W6PQ8NHA6 318 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 CD248Q9HCU0 757 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 ST3GAL5Q9UNP4 418 aa15.77■□□□□ 0.12
HCFC1-201ENST00000310441 CKMP06732 381 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 MYL9P24844 172 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 CCR1P32246 355 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 ZFP28Q8NHY6 868 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 SGF29Q96ES7 293 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 SLC2A4P14672 509 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 STARD3Q14849 445 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 MAPK11Q15759 364 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 KCNMB4Q86W47 210 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 COX4I2Q96KJ9 171 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 AGPAT3Q9NRZ7 376 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 LIMD1Q9UGP4 676 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 TUBE1Q9UJT0 475 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 CDH9Q9ULB4 789 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 NUDT14O95848 222 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 YY1P25490 414 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 AP4E1Q9UPM8 1137 aa15.77■□□□□ 0.11
HCFC1-201ENST00000310441 ERI2A8K979 691 aaKnown RBP15.76■□□□□ 0.11
HCFC1-201ENST00000310441 ATMINO43313 823 aaPredicted RBP15.76■□□□□ 0.11
HCFC1-201ENST00000310441 ETS1P14921 441 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 FIGNQ5HY92 759 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 ERMARDQ5T6L9 678 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 SLC44A5Q8NCS7 719 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 ATL1Q8WXF7 558 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 AASDHPPTQ9NRN7 309 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 KANSL3Q9P2N6 904 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 C3orf18Q9UK00 162 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 ZNF521Q96K83 1311 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 PON1P27169 355 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 MAPK9P45984 424 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 NEXMIFQ5QGS0 1516 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 HLA-DQA2P01906 255 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 SEC24CP53992 1094 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 AHCYL2Q96HN2 611 aaKnown RBP15.76■□□□□ 0.11
HCFC1-201ENST00000310441 RNF145Q96MT1 663 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 VAT1Q99536 393 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 TBC1D30Q9Y2I9 924 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 CDC42EP4Q9H3Q1 356 aaKnown RBP15.76■□□□□ 0.11
HCFC1-201ENST00000310441 ACSL4O60488 711 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 URODP06132 367 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 IL12AP29459 219 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 RHOAP61586 193 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 BST2Q10589 180 aaKnown RBP15.76■□□□□ 0.11
HCFC1-201ENST00000310441 NYAP2Q9P242 653 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 DNPEPQ9ULA0 475 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 OGTO15294 1046 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 GLRBP48167 497 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 HSF2Q03933 536 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 GJD3Q8N144 294 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 RHOCP08134 193 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 LYPLAL1Q5VWZ2 237 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 DAGLBQ8NCG7 672 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 NKX2-3Q8TAU0 364 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 ZNF304Q9HCX3 659 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 CCNB1IP1Q9NPC3 277 aa15.76■□□□□ 0.11
HCFC1-201ENST00000310441 CCDC177Q9NQR7 707 aaPredicted RBP15.76■□□□□ 0.11
HCFC1-201ENST00000310441 ENTPD3O75355 529 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 UMPSP11172 480 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 UGT1A5P35504 534 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 RAB27AP51159 221 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 PTENP60484 403 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 OTUD3Q5T2D3 398 aaPredicted RBP15.75■□□□□ 0.11
HCFC1-201ENST00000310441 TSHZ1Q6ZSZ6 1077 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 FAM92BQ6ZTR7 304 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 OSGEPL1Q9H4B0 414 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 TIMMDC1Q9NPL8 285 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 GJB4Q9NTQ9 266 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 CPS1P31327 1500 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 RPL9P32969 192 aaKnown RBP15.75■□□□□ 0.11
HCFC1-201ENST00000310441 GALNT3Q14435 633 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 RFX4Q33E94 735 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 HHIPL2Q6UWX4 724 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 METTL3Q86U44 580 aaKnown RBP15.75■□□□□ 0.11
HCFC1-201ENST00000310441 WDR49Q8IV35 697 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 ACOX2Q99424 681 aa15.75■□□□□ 0.11
HCFC1-201ENST00000310441 SEPHS2Q99611 448 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms