RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CPA5Q8WXQ8 436 aa20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 DNASE2BQ8WZ79 361 aa20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 PRCCQ92733 491 aaPredicted RBP20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 PCDHB18PQ96TA0 734 aa20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 SYNCQ9H7C4 482 aa20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 EPG5Q9HCE0 2579 aa20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 A0A1B0GVM2 712 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 TYW5A2RUC4 315 aaKnown RBP20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 TCAF2A6NFQ2 919 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 ASLP04424 464 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 ADRB1P08588 477 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 ENGP17813 658 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 MZF1P28698 734 aaPredicted RBP20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 DPP6P42658 865 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 PLK1P53350 603 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 CDR2Q01850 454 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 ARID5AQ03989 594 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 PTP4A2Q12974 167 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 NME3Q13232 169 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 NAA35Q5VZE5 725 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 IL31Q6EBC2 164 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 ZNF677Q86XU0 584 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 C1orf216Q8TAB5 229 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 TBCBQ99426 244 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 GPR174Q9BXC1 333 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 RSPH9Q9H1X1 276 aaPredicted RBP20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 TMEM9BQ9NQ34 198 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 TMPRSS4Q9NRS4 437 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 RRN3Q9NYV6 651 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 KIAA1522Q9P206 1035 aaPredicted RBP20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 SLCO3A1Q9UIG8 710 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 ERVW-1Q9UQF0 538 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 DAAM1Q9Y4D1 1078 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 OR51B4Q9Y5P0 310 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 SLCO1B1Q9Y6L6 691 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 CABIN1Q9Y6J0 2220 aa20.46■□□□□ 0.87
PDZRN3-202ENST00000308537 CHD5Q8TDI0 1954 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 SIN3BO75182 1162 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 SERPINF2P08697 491 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 UNGP13051 313 aaPredicted RBP20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 ABCB4P21439 1286 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 MMP8P22894 467 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 MAOBP27338 520 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 SNX16P57768 344 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 DUOXA1Q1HG43 343 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 SLC25A52Q3SY17 297 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 FKBP15Q5T1M5 1219 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 C9orf64Q5T6V5 341 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 FAM102AQ5T9C2 384 aaPredicted RBP20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 ARCQ7LC44 396 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 DHX40Q8IX18 779 aaKnown RBP20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 CADM4Q8NFZ8 388 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 FUCA2Q9BTY2 467 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 FBRSQ9HAH7 460 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 VANGL2Q9ULK5 521 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 SLC6A14Q9UN76 642 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 SNX10Q9Y5X0 201 aa20.45■□□□□ 0.86
PDZRN3-202ENST00000308537 TTC34A8MYJ7 566 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 H0Y626 953 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 ENDOD1O94919 500 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 SRPRAP08240 638 aaKnown RBP20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 OXTRP30559 389 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 ACSL1P33121 698 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 STK19P49842 368 aaPredicted RBP20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 SULT1E1P49888 294 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 RNASE9P60153 205 aaKnown RBP20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 RAB6CQ53S08 254 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 BRMS1LQ5PSV4 323 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 TTC39BQ5VTQ0 682 aaPredicted RBP20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 AOPEPQ8N6M6 819 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 PTPRN2Q92932 1015 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 FOXJ1Q92949 421 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 TKTL2Q9H0I9 626 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 RAB6CQ9H0N0 254 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 PDCL3Q9H2J4 239 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 ZNF212Q9UDV6 495 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 SUN2Q9UH99 717 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 SLC12A6Q9UHW9 1150 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 SPEGQ15772 3267 aa20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 MAP1BP46821 2468 aaKnown RBP20.44■□□□□ 0.86
PDZRN3-202ENST00000308537 METTL12A8MUP2 240 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 NDUFS2O75306 463 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 CNTN5O94779 1100 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 KCNK5O95279 499 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 PDGFRAP16234 1089 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 NUMBP49757 651 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 ZBTB16Q05516 673 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 SLC12A1Q13621 1099 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 ANO6Q4KMQ2 910 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 ALFQ53S48 1182 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 CEP76Q8TAP6 659 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 FRS2Q8WU20 508 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 RPL10LQ96L21 214 aaKnown RBP20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 RPRD1AQ96P16 312 aaPredicted RBP20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 FAM129BQ96TA1 746 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 BPIFA3Q9BQP9 254 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 ORAI3Q9BRQ5 295 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 NUP58Q9BVL2 599 aa20.43■□□□□ 0.86
PDZRN3-202ENST00000308537 NUSAP1Q9BXS6 441 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms