RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 CROTQ9UKG9 612 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 SLIT2O94813 1529 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 UBA6A0AVT1 1052 aaPredicted RBP13.75□□□□□ -0.21
SEC23A-201ENST00000307712 GJB1P08034 283 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 NR2C2P49116 596 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 PLIN5Q00G26 463 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 ANO4Q32M45 955 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 SPATA6LQ8N4H0 392 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 ZNF781Q8N8C0 355 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 DHX33Q9H6R0 707 aaKnown RBP13.75□□□□□ -0.21
SEC23A-201ENST00000307712 SYBUQ9NX95 663 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 TSR3Q9UJK0 312 aaKnown RBP13.75□□□□□ -0.21
SEC23A-201ENST00000307712 PRPF19Q9UMS4 504 aaKnown RBP13.75□□□□□ -0.21
SEC23A-201ENST00000307712 TEX264Q9Y6I9 313 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 ZNF541Q9H0D2 1346 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 A0A087WXM4 84 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 SLC15A5A6NIM6 579 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 HMOX2P30519 316 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 MPP5Q8N3R9 675 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 RP9Q8TA86 221 aaKnown RBP13.75□□□□□ -0.21
SEC23A-201ENST00000307712 SDCBP2Q9H190 292 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 SMARCAD1Q9H4L7 1026 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 ZNF142P52746 1687 aaPredicted RBP13.74□□□□□ -0.21
SEC23A-201ENST00000307712 A0A087WZ62 844 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 ACKR2O00590 384 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 BACE1P56817 501 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 C21orf59P57076 290 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 OTUD3Q5T2D3 398 aaPredicted RBP13.74□□□□□ -0.21
SEC23A-201ENST00000307712 PDSS2Q86YH6 399 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 KBTBD2Q8IY47 623 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 DRAXINQ8NBI3 349 aaPredicted RBP13.74□□□□□ -0.21
SEC23A-201ENST00000307712 FNIP1Q8TF40 1166 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 TUBGCP3Q96CW5 907 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 FDXACB1Q9BRP7 624 aaPredicted RBP13.74□□□□□ -0.21
SEC23A-201ENST00000307712 B3GNT5Q9BYG0 378 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 DEFB129Q9H1M3 183 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 PRDM12Q9H4Q4 367 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 DDIT4Q9NX09 232 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 NSMCE4AQ9NXX6 385 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 B4GALT5O43286 388 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 C2P06681 752 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 GOT1P17174 413 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 GCAP28676 217 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 CRABP2P29373 138 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 PPARGP37231 505 aaPredicted RBP13.74□□□□□ -0.21
SEC23A-201ENST00000307712 CCNA1P78396 465 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 SPANXN3Q5MJ09 141 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 FRMD7Q6ZUT3 714 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 PHTF2Q8N3S3 785 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 ADCY4Q8NFM4 1077 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 GIPC3Q8TF64 312 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 GIPC2Q8TF65 315 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 CIB1Q99828 191 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 TMEM134Q9H6X4 195 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 RIPK3Q9Y572 518 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 MRPL42Q9Y6G3 142 aaKnown RBP13.74□□□□□ -0.21
SEC23A-201ENST00000307712 VAPBO95292 243 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 METTL18O95568 372 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 ESRRBO95718 433 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 OCM2P0CE71 109 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 OCMP0CE72 109 aaPredicted RBP13.74□□□□□ -0.21
SEC23A-201ENST00000307712 CYP2C8P10632 490 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 NCAM1P13591 858 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 ETFBP38117 255 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 GRIA3P42263 894 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 ACADSBP45954 432 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 FOXD4Q12950 439 aaPredicted RBP13.74□□□□□ -0.21
SEC23A-201ENST00000307712 LPIN1Q14693 890 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 LY6KQ17RY6 165 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 SPDYE2Q495Y8 402 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 C6orf10Q5SRN2 563 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 SAMD7Q7Z3H4 446 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 FAM47BQ8NA70 645 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 APPL2Q8NEU8 664 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 TLE6Q9H808 572 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 VTI1BQ9UEU0 232 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 ANGPTL3Q9Y5C1 460 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 PTPRJQ12913 1337 aa13.74□□□□□ -0.21
SEC23A-201ENST00000307712 ATRNL1Q5VV63 1379 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 KLF11O14901 512 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 INPP4BO15327 924 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 PAPSS1O43252 624 aaPredicted RBP13.73□□□□□ -0.21
SEC23A-201ENST00000307712 ATP6V1G1O75348 118 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 VTNP04004 478 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 TTLL4Q14679 1199 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 KLHL23Q8NBE8 558 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 CLEC4DQ8WXI8 215 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 DOLKQ9UPQ8 538 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 FARP1Q9Y4F1 1045 aaPredicted RBP13.73□□□□□ -0.21
SEC23A-201ENST00000307712 PKD1L3Q7Z443 1732 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 TTC36A6NLP5 189 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 CRTAMO95727 393 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 KCTD4Q8WVF5 259 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 GATA6Q92908 595 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 CELF6Q96J87 481 aaKnown RBP13.73□□□□□ -0.21
SEC23A-201ENST00000307712 SEPHS2Q99611 448 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 ACO2Q99798 780 aaKnown RBP13.73□□□□□ -0.21
SEC23A-201ENST00000307712 LHX5Q9H2C1 402 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 MYOZ2Q9NPC6 264 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 KLK14Q9P0G3 267 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms