RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 CCR10P46092 362 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 BST2Q10589 180 aaKnown RBP11.59□□□□□ -0.55
PHTF2-203ENST00000307305 KCTD21Q4G0X4 260 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 POTEAQ6S8J7 498 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 SCIMPQ6UWF3 145 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 NCLNQ969V3 563 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 SPATA13Q96N96 652 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 FRMD8P1Q9BZ68 369 aaPredicted RBP11.59□□□□□ -0.55
PHTF2-203ENST00000307305 NXF3Q9H4D5 531 aaKnown RBP11.59□□□□□ -0.55
PHTF2-203ENST00000307305 ECM29Q5VYK3 1845 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 ARHGEF37A1IGU5 675 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 SLC15A5A6NIM6 579 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 ERI2A8K979 691 aaKnown RBP11.59□□□□□ -0.55
PHTF2-203ENST00000307305 STX16-NPEPL1H3BU86 382 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 NR5A2O00482 541 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 SCAMP3O14828 347 aaKnown RBP11.59□□□□□ -0.55
PHTF2-203ENST00000307305 MSCO60682 206 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 TM7SF2O76062 418 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 STMN1P16949 149 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 ERCC2P18074 760 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 NFKB1P19838 968 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 ALDH1A3P47895 512 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 CXCR3P49682 368 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 HDAC4P56524 1084 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 FKBP1AP62942 108 aaKnown RBP11.59□□□□□ -0.55
PHTF2-203ENST00000307305 CCDC142Q17RM4 750 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 SGO1Q5FBB7 561 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 PPHLN1Q8NEY8 458 aaKnown RBP11.59□□□□□ -0.55
PHTF2-203ENST00000307305 URGCPQ8TCY9 931 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 IFT43Q96FT9 208 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 PSAT1Q9Y617 370 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 E7ENQ6 273 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 GSTA4O15217 222 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 ARIH2O95376 493 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 EDN1P05305 212 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 C2P06681 752 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 HOXC6P09630 235 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 YBX3P16989 372 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■■■■□ 21.3
PHTF2-203ENST00000307305 LMO2P25791 158 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 GRIA4P48058 902 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 KPNA2P52292 529 aaKnown RBP11.59□□□□□ -0.55
PHTF2-203ENST00000307305 CDH13P55290 713 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 TDRPQ86YL5 185 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 DNERQ8NFT8 737 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 TUBGCP3Q96CW5 907 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 CSPG4P5Q96PW8 444 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 SEPHS2Q99611 448 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 TMEM79Q9BSE2 394 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 MYO9BQ13459 2157 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 ARHGAP10A1A4S6 786 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 ASB14A6NK59 587 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 TRDMT1O14717 391 aaKnown RBP11.59□□□□□ -0.55
PHTF2-203ENST00000307305 CILPO75339 1184 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 TCEA3O75764 348 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 PSMC3P17980 439 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 RALGDSQ12967 914 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 OTUD3Q5T2D3 398 aaPredicted RBP11.59□□□□□ -0.55
PHTF2-203ENST00000307305 WSCD1Q658N2 575 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 NOTUMQ6P988 496 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 LDB1Q86U70 411 aaPredicted RBP11.59□□□□□ -0.55
PHTF2-203ENST00000307305 ZNF398Q8TD17 642 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 FAM193BQ96PV7 902 aaPredicted RBP11.59□□□□□ -0.55
PHTF2-203ENST00000307305 SUN2Q9UH99 717 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 AFF4Q9UHB7 1163 aaKnown RBP11.59□□□□□ -0.55
PHTF2-203ENST00000307305 DSEQ9UL01 958 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 TOGARAM1Q9Y4F4 1720 aa11.59□□□□□ -0.55
PHTF2-203ENST00000307305 GON4LQ3T8J9 2241 aa11.58□□□□□ -0.55
PHTF2-203ENST00000307305 E2F6O75461 281 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 LGALS2P05162 132 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 CHRNGP07510 517 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 SERPINA6P08185 405 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 LINGO3P0C6S8 592 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 FOLH1Q04609 750 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 C16orf87Q6PH81 154 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 NET1Q7Z628 596 aaPredicted RBP11.58□□□□□ -0.56
PHTF2-203ENST00000307305 PHTF2Q8N3S3 785 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 PNPLA1Q8N8W4 532 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 SDCCAG3Q96C92 435 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 STRA6Q9BX79 667 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 ACE2Q9BYF1 805 aaPredicted RBP11.58□□□□□ -0.56
PHTF2-203ENST00000307305 RBM22Q9NW64 420 aaKnown RBP eCLIP11.58□□□□□ -0.568e-9■■■■■ 36.9
PHTF2-203ENST00000307305 NAV1Q8NEY1 1877 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 MT-ND1P03886 318 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 ADORA2AP29274 412 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 GPD2P43304 727 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 RTP1P59025 263 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 CDC16Q13042 620 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 PRKD1Q15139 912 aaPredicted RBP11.58□□□□□ -0.56
PHTF2-203ENST00000307305 SLC10A6Q3KNW5 377 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 PITRM1Q5JRX3 1037 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 PPM1LQ5SGD2 360 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 ZBTB49Q6ZSB9 765 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 MAB21L3Q8N8X9 362 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 DENND1AQ8TEH3 1009 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 DDX43Q9NXZ2 648 aaKnown RBP11.58□□□□□ -0.56
PHTF2-203ENST00000307305 HACD3Q9P035 362 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 PRG3Q9Y2Y8 225 aaPredicted RBP11.58□□□□□ -0.56
PHTF2-203ENST00000307305 PCDHA11Q9Y5I1 949 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 PGAM1P18669 254 aa11.58□□□□□ -0.56
PHTF2-203ENST00000307305 MAXP61244 160 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms