RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 GPX6P59796 221 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 WDR5P61964 334 aaKnown RBP12.33□□□□□ -0.44
TPM3-202ENST00000302206 GAD2Q05329 585 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 TAF10Q12962 218 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 DUSP4Q13115 394 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 KLHL38Q2WGJ6 581 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 BBS9Q3SYG4 887 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 GLIPR1L2Q4G1C9 344 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 ARTNQ5T4W7 220 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 SNX30Q5VWJ9 437 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 AFMIDQ63HM1 303 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 KIAA1841Q6NSI8 718 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 TADA2BQ86TJ2 420 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 DDX53Q86TM3 631 aaKnown RBP12.33□□□□□ -0.44
TPM3-202ENST00000302206 PALM2Q8IXS6 379 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 NPWQ8N729 165 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 ATP6V0D2Q8N8Y2 350 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 COLGALT1Q8NBJ5 622 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 CCNYQ8ND76 341 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 ATXN2LQ8WWM7 1075 aaKnown RBP12.33□□□□□ -0.44
TPM3-202ENST00000302206 TRIM43Q96BQ3 446 aaPredicted RBP12.33□□□□□ -0.44
TPM3-202ENST00000302206 ACSS3Q9H6R3 686 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 VPS37BQ9H9H4 285 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 SPG21Q9NZD8 308 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 PPARGC1AQ9UBK2 798 aaKnown RBP12.33□□□□□ -0.44
TPM3-202ENST00000302206 SLC27A5Q9Y2P5 690 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 HBS1LQ9Y450 684 aaKnown RBP12.33□□□□□ -0.44
TPM3-202ENST00000302206 SNX10Q9Y5X0 201 aa12.33□□□□□ -0.44
TPM3-202ENST00000302206 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.33□□□□□ -0.44
TPM3-202ENST00000302206 SMIM23A6NLE4 172 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 ERI2A8K979 691 aaKnown RBP12.32□□□□□ -0.44
TPM3-202ENST00000302206 MSI1O43347 362 aaKnown RBP12.32□□□□□ -0.44
TPM3-202ENST00000302206 APRTP07741 180 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 RAG1P15918 1043 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 ATF6P18850 670 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 CCNCP24863 283 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 HPDP32754 393 aaPredicted RBP12.32□□□□□ -0.44
TPM3-202ENST00000302206 OR1D2P34982 312 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 PPM1AP35813 382 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 ELK3P41970 407 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 SLCO1A2P46721 670 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 ATP1A2P50993 1020 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 GNGT1P63211 74 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 IFI35P80217 286 aaPredicted RBP12.32□□□□□ -0.44
TPM3-202ENST00000302206 CREMQ03060 361 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 DMTNQ08495 405 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 GRIN2CQ14957 1233 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 SPOUT1Q5T280 376 aaKnown RBP12.32□□□□□ -0.44
TPM3-202ENST00000302206 ITPRIPL1Q6GPH6 555 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 KLHDC10Q6PID8 442 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 CAND1Q86VP6 1230 aaKnown RBP12.32□□□□□ -0.44
TPM3-202ENST00000302206 ANKMY2Q8IV38 441 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 KLHDC8BQ8IXV7 354 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 ZNF683Q8IZ20 524 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 CNPY4Q8N129 248 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 ZNF567Q8N184 647 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 ZNF461Q8TAF7 563 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 MAML1Q92585 1016 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 FATE1Q969F0 183 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 TMEM169Q96HH4 297 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 BTN2A3PQ96KV6 586 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 CLSTN3Q9BQT9 956 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 WDR83Q9BRX9 315 aaKnown RBP12.32□□□□□ -0.44
TPM3-202ENST00000302206 DHRS4Q9BTZ2 278 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 RETREG1Q9H6L5 497 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 IL23AQ9NPF7 189 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 MARCH2Q9P0N8 246 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 SENP1Q9P0U3 644 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 RABGEF1Q9UJ41 708 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 HS3ST4Q9Y661 456 aa12.32□□□□□ -0.44
TPM3-202ENST00000302206 IGLV3-10A0A075B6K4 115 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 E9PAM4 449 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 TRDMT1O14717 391 aaKnown RBP12.31□□□□□ -0.44
TPM3-202ENST00000302206 ADAM12O43184 909 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 PSMD3O43242 534 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 CSH1P0DML2 217 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 CSH2P0DML3 217 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 CSF2RAP15509 400 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 ITGB8P26012 769 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 PTPN3P26045 913 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 GCAP28676 217 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 STX2P32856 288 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 TUBP50607 506 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 GEMIN4P57678 1058 aaKnown RBP12.31□□□□□ -0.44
TPM3-202ENST00000302206 DEFB103AP81534 67 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 EFEMP1Q12805 493 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 RAB33AQ14088 237 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 BTG3Q14201 252 aaPredicted RBP12.31□□□□□ -0.44
TPM3-202ENST00000302206 RASIP1Q5U651 963 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 RWDD4Q6NW29 188 aaKnown RBP12.31□□□□□ -0.44
TPM3-202ENST00000302206 LRRC8BQ6P9F7 803 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 LEKR1Q6ZMV7 388 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 C3orf62Q6ZUJ4 267 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 CYS1Q717R9 158 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 ZNF534Q76KX8 674 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 ZNF771Q7L3S4 317 aaPredicted RBP12.31□□□□□ -0.44
TPM3-202ENST00000302206 EXOC3L1Q86VI1 746 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 CCNJLQ8IV13 435 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 TAB3Q8N5C8 712 aaPredicted RBP12.31□□□□□ -0.44
TPM3-202ENST00000302206 RTL3Q8N8U3 475 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms