RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 RCN1Q15293 331 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 PPM1JQ5JR12 505 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 GRTP1Q5TC63 336 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 RFWD3Q6PCD5 774 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 TMPRSS6Q8IU80 811 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 SMARCD1Q96GM5 515 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 THTPAQ9BU02 230 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 COLEC11Q9BWP8 271 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 CRTAC1Q9NQ79 661 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 RRN3Q9NYV6 651 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 PSAT1Q9Y617 370 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 USP3Q9Y6I4 520 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 FAM72CH0Y354 149 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 IL1BP01584 269 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 RALBP11234 206 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 TPH1P17752 444 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 GRK2P25098 689 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 PTPN3P26045 913 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 AIF1P55008 147 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 COG7P83436 770 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 OLIG2Q13516 323 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 CTC1Q2NKJ3 1217 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 FAM72AQ5TYM5 149 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 FAM72DQ6L9T8 149 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 RINLQ6ZS11 566 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 CTU1Q7Z7A3 348 aaKnown RBP13.94□□□□□ -0.18
CDH8-201ENST00000299345 FAM72BQ86X60 149 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 MIPEPQ99797 713 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 TAGLN3Q9UI15 199 aa13.94□□□□□ -0.18
CDH8-201ENST00000299345 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.93□□□□□ -0.18
CDH8-201ENST00000299345 MEIS3P2A8K0S8 358 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 DFFAO00273 331 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 ZBTB24O43167 697 aaPredicted RBP13.93□□□□□ -0.18
CDH8-201ENST00000299345 PLIN3O60664 434 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 ZNF865P0CJ78 1059 aaPredicted RBP13.93□□□□□ -0.18
CDH8-201ENST00000299345 TPBGLP0DKB5 382 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 CPA3P15088 417 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 ABCG1P45844 678 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 ERFP50548 548 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 XKR4Q5GH76 650 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 STEAP4Q687X5 459 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 PAQR9Q6ZVX9 377 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 CMC1Q7Z7K0 106 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 SLC2A13Q96QE2 648 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 FAM96AQ9H5X1 160 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 FBXW11Q9UKB1 542 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 TRHDEQ9UKU6 1024 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 CDH9Q9ULB4 789 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 TRPV2Q9Y5S1 764 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 LRRC37A2A6NM11 1700 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 SERPINB8P50452 374 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 THOC5Q13769 683 aaKnown RBP13.93□□□□□ -0.18
CDH8-201ENST00000299345 ITGA9Q13797 1035 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 PTCD3Q96EY7 689 aaKnown RBP13.93□□□□□ -0.18
CDH8-201ENST00000299345 NAF1Q96HR8 494 aaKnown RBP13.93□□□□□ -0.18
CDH8-201ENST00000299345 SCYL1Q96KG9 808 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 SMOQ99835 787 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 BRD8Q9H0E9 1235 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 NOD1Q9Y239 953 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 PTCH2Q9Y6C5 1203 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 PAPPA2Q9BXP8 1791 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 HMX2A2RU54 273 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 AP2A1O95782 977 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 ALDOAP04075 364 aaKnown RBP13.93□□□□□ -0.18
CDH8-201ENST00000299345 ODC1P11926 461 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 NFKB1P19838 968 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 BDNFP23560 247 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 DNAL1Q4LDG9 190 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 CXCL17Q6UXB2 119 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 NTAN1Q96AB6 310 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 PPP1R10Q96QC0 940 aaKnown RBP13.93□□□□□ -0.18
CDH8-201ENST00000299345 FLRT1Q9NZU1 646 aa13.93□□□□□ -0.18
CDH8-201ENST00000299345 SF3B1O75533 1304 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDH8-201ENST00000299345 ALDH1A2O94788 518 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 POMCP01189 267 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 DPYSQ14117 519 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 TBCCQ15814 346 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 KHDC1Q4VXA5 237 aaKnown RBP13.92□□□□□ -0.18
CDH8-201ENST00000299345 NAPEPLDQ6IQ20 393 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 C10orf107Q8IVU9 208 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 DCLK2Q8N568 766 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 HASPINQ8TF76 798 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 BATF3Q9NR55 127 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 SNX10Q9Y5X0 201 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 NUMBLQ9Y6R0 609 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 MGAMO43451 1857 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 EIF4E1BA6NMX2 242 aaKnown RBP13.92□□□□□ -0.18
CDH8-201ENST00000299345 ERI2A8K979 691 aaKnown RBP13.92□□□□□ -0.18
CDH8-201ENST00000299345 FAM163BP0C2L3 166 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 PTDSS1P48651 473 aaKnown RBP13.92□□□□□ -0.18
CDH8-201ENST00000299345 MPP3Q13368 585 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 CERCAMQ5T4B2 595 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 ARNTL2Q8WYA1 636 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 SNX15Q9NRS6 342 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 DCLK1O15075 740 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 CAPN15O75808 1086 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 KLHL2O95198 593 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 AKR1A1P14550 325 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 CBLBQ13191 982 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 C1orf146Q5VVC0 180 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms