RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 CELF5Q8N6W0 485 aaKnown RBP6.13□□□□□ -1.43
SSX3-201ENST00000298396 CCDC185Q8N715 623 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 MSANTD4Q8NCY6 345 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 ZNF564Q8TBZ8 553 aaPredicted RBP6.13□□□□□ -1.43
SSX3-201ENST00000298396 ACDQ96AP0 544 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 ACSF2Q96CM8 615 aaPredicted RBP6.13□□□□□ -1.43
SSX3-201ENST00000298396 PGAP3Q96FM1 320 aaPredicted RBP6.13□□□□□ -1.43
SSX3-201ENST00000298396 DMRTB1Q96MA1 342 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 CNTNAP3BQ96NU0 1288 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 PEBP4Q96S96 227 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 FAM83CQ9BQN1 747 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 NUP85Q9BW27 656 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 CNTNAP3Q9BZ76 1288 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 DEF6Q9H4E7 631 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 ZFP14Q9HCL3 533 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 OLA1Q9NTK5 396 aaKnown RBP6.13□□□□□ -1.43
SSX3-201ENST00000298396 OBP2AQ9NY56 170 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 COX16Q9P0S2 106 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 WDR35Q9P2L0 1181 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 TRIM10Q9UDY6 481 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 ZMYM5Q9UJ78 669 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 GDF2Q9UK05 429 aaPredicted RBP6.13□□□□□ -1.43
SSX3-201ENST00000298396 NEU3Q9UQ49 428 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 HBS1LQ9Y450 684 aaKnown RBP6.13□□□□□ -1.43
SSX3-201ENST00000298396 NR2E1Q9Y466 385 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 PCDHA13Q9Y5I0 950 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 SNX10Q9Y5X0 201 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 WNT6Q9Y6F9 365 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 ZFP37Q9Y6Q3 630 aaPredicted RBP6.13□□□□□ -1.43
SSX3-201ENST00000298396 CEP192Q8TEP8 1941 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 SPAG17Q6Q759 2223 aa6.13□□□□□ -1.43
SSX3-201ENST00000298396 GOLGA6L7A0A1B0GV03 622 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 E2F8A0AVK6 867 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 M0QYT0 321 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 PJA2O43164 708 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 ARHGAP6O43182 974 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 MTA2O94776 668 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 CYP17A1P05093 508 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 GPD1P21695 349 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 IL1R2P27930 398 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 ADH6P28332 368 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 CORO1AP31146 461 aaKnown RBP6.12□□□□□ -1.43
SSX3-201ENST00000298396 CYLC1P35663 651 aaPredicted RBP6.12□□□□□ -1.43
SSX3-201ENST00000298396 SULT1E1P49888 294 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 IRAK1P51617 712 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 VAV2P52735 878 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 ZNF143P52747 638 aaPredicted RBP6.12□□□□□ -1.43
SSX3-201ENST00000298396 VCPP55072 806 aaKnown RBP6.12□□□□□ -1.43
SSX3-201ENST00000298396 TBX4P57082 545 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 SNX16P57768 344 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 ATP11AP98196 1134 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 RING1Q06587 406 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 MESP2Q0VG99 397 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 NUMA1Q14980 2115 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 CDO1Q16878 200 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 RNF43Q68DV7 783 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 TXNRD3NBQ6F5E7 133 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 PPP1R2P3Q6NXS1 205 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 HTR3DQ70Z44 454 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 MTSS1LQ765P7 747 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 RSRC2Q7L4I2 434 aaKnown RBP6.12□□□□□ -1.43
SSX3-201ENST00000298396 C14orf80Q86SX3 495 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 FANCMQ8IYD8 2048 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 ZNF683Q8IZ20 524 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 GOLGA6L1Q8N7Z2 621 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 SLC35G2Q8TBE7 412 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 BPIFB1Q8TDL5 484 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 FNIP1Q8TF40 1166 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 RNF139Q8WU17 664 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 FAM172AQ8WUF8 416 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 RFFLQ8WZ73 363 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 PLD4Q96BZ4 506 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 TRIM11Q96F44 468 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 PRICKLE1Q96MT3 831 aaPredicted RBP6.12□□□□□ -1.43
SSX3-201ENST00000298396 CDK5RAP1Q96SZ6 601 aaKnown RBP6.12□□□□□ -1.43
SSX3-201ENST00000298396 PRMT1Q99873 361 aaKnown RBP6.12□□□□□ -1.43
SSX3-201ENST00000298396 CNPY3Q9BT09 278 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 SELENOOQ9BVL4 669 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 GOLPH3Q9H4A6 298 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 FAM204AQ9H8W3 233 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 KIF9Q9HAQ2 790 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 PARVAQ9NVD7 372 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 DDIT4Q9NX09 232 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 ARHGEF38Q9NXL2 777 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 STOML2Q9UJZ1 356 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 AGO1Q9UL18 857 aaKnown RBP6.12□□□□□ -1.43
SSX3-201ENST00000298396 INTUQ9ULD6 942 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 PYCARDQ9ULZ3 195 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 FAM50BQ9Y247 325 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 TLR6Q9Y2C9 796 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 SCINQ9Y6U3 715 aa6.12□□□□□ -1.43
SSX3-201ENST00000298396 LRRK1Q38SD2 2015 aa6.11□□□□□ -1.43
SSX3-201ENST00000298396 PLXND1Q9Y4D7 1925 aa6.11□□□□□ -1.43
SSX3-201ENST00000298396 ANTXRLA6NF34 631 aa6.11□□□□□ -1.43
SSX3-201ENST00000298396 USP27XA6NNY8 438 aa6.11□□□□□ -1.43
SSX3-201ENST00000298396 BTNL10A8MVZ5 291 aa6.11□□□□□ -1.43
SSX3-201ENST00000298396 GOLGA6L6A8MZA4 724 aa6.11□□□□□ -1.43
SSX3-201ENST00000298396 FAM72CH0Y354 149 aa6.11□□□□□ -1.43
SSX3-201ENST00000298396 TRDMT1O14717 391 aaKnown RBP6.11□□□□□ -1.43
SSX3-201ENST00000298396 CAPN9O14815 690 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms