RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 STAU1O95793 577 aaKnown RBP24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 LTFP02788 710 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 FDFT1P37268 417 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 ABCE1P61221 599 aaKnown RBP24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 POU5F1BQ06416 359 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 FBXO47Q5MNV8 452 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 CERCAMQ5T4B2 595 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 ERO1BQ86YB8 467 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 COG4Q9H9E3 785 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 SPATS2LQ9NUQ6 558 aaKnown RBP24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 DCDC2Q9UHG0 476 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 LYNP07948 512 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 CPA3P15088 417 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 MATKP42679 507 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 IREB2P48200 963 aaKnown RBP24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 ATXN3P54252 364 aaPredicted RBP24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 CCNIQ14094 377 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 RAB3IL1Q8TBN0 382 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 S100A14Q9HCY8 104 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 PIGVQ9NUD9 493 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 KPNA7A9QM74 516 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 ZNF195O14628 629 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 RNASEH1O60930 286 aaKnown RBP24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 STK10O94804 968 aaKnown RBP24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 SFT2D3Q587I9 215 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 APBB2Q92870 758 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 WDR55Q9H6Y2 383 aaPredicted RBP24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 ASB3Q9Y575 518 aa24.99■■□□□ 1.59
SPTSSA-201ENST00000298130 MAGEA13PA6NCF6 341 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 SERPINB6P35237 376 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 CBLBQ13191 982 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 CFAP157Q5JU67 520 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 ARHGAP17Q68EM7 881 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 FSTL4Q6MZW2 842 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 OSTM1Q86WC4 334 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 GPC2Q8N158 579 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 TTC39CQ8N584 583 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 PAPOLBQ9NRJ5 636 aaKnown RBP24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 I6L893 689 aaPredicted RBP24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 BUD23O43709 281 aaKnown RBP24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 POLBP06746 335 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 PEX2P28328 305 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 SERPINB5P36952 375 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 ZBTB6Q15916 424 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 C4orf22Q6V702 233 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 ZDHHC17Q8IUH5 632 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 OR52B2Q96RD2 323 aa24.98■■□□□ 1.59
SPTSSA-201ENST00000298130 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 PPP1R12AO14974 1030 aaPredicted RBP24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 HSPA4LO95757 839 aa24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 CHRNGP07510 517 aa24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 CNTFP26441 200 aa24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 GLRBP48167 497 aa24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 IRX1P78414 480 aaPredicted RBP24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 PAXIP1Q6ZW49 1069 aaPredicted RBP24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 GORASP1Q9BQQ3 440 aa24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 CDH22Q9UJ99 828 aa24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 BPTFQ12830 3046 aa24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 EEF2KO00418 725 aaKnown RBP24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 ITGAXP20702 1163 aa24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 GP5P40197 560 aa24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 ITGA7Q13683 1181 aa24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 SLC25A52Q3SY17 297 aa24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 PPM1LQ5SGD2 360 aa24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 PPTC7Q8NI37 304 aa24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 CHRAC1Q9NRG0 131 aa24.97■■□□□ 1.59
SPTSSA-201ENST00000298130 ASB14A6NK59 587 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 AVPR1AP37288 418 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 SLC27A1Q6PCB7 646 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 SLC7A14Q8TBB6 771 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 TMEM40Q8WWA1 233 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 IFT43Q96FT9 208 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 A0A096LPK6 155 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 SMIM28A0A1B0GU29 152 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 NRP1O14786 923 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 OPHN1O60890 802 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 KLHL2O95198 593 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 SLC30A9Q6PML9 568 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 SPATA6LQ8N4H0 392 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 ZCWPW1Q9H0M4 648 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 C1orf21Q9H246 121 aa24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 PIN4Q9Y237 131 aaKnown RBP24.96■■□□□ 1.59
SPTSSA-201ENST00000298130 ZBTB24O43167 697 aaPredicted RBP24.95■■□□□ 1.59
SPTSSA-201ENST00000298130 AQP4P55087 323 aa24.95■■□□□ 1.59
SPTSSA-201ENST00000298130 MAP3K7CLP57077 242 aa24.95■■□□□ 1.59
SPTSSA-201ENST00000298130 SNX16P57768 344 aa24.95■■□□□ 1.59
SPTSSA-201ENST00000298130 UNC93AQ86WB7 457 aa24.95■■□□□ 1.59
SPTSSA-201ENST00000298130 RNF148Q8N7C7 305 aa24.95■■□□□ 1.59
SPTSSA-201ENST00000298130 APPL2Q8NEU8 664 aa24.95■■□□□ 1.59
SPTSSA-201ENST00000298130 MARK4Q96L34 752 aa24.95■■□□□ 1.59
SPTSSA-201ENST00000298130 AIM2O14862 343 aa24.95■■□□□ 1.58
SPTSSA-201ENST00000298130 MYCNP04198 464 aaPredicted RBP24.95■■□□□ 1.58
SPTSSA-201ENST00000298130 MLNP12872 115 aa24.95■■□□□ 1.58
SPTSSA-201ENST00000298130 ERCC2P18074 760 aa24.95■■□□□ 1.58
SPTSSA-201ENST00000298130 DEUP1Q05D60 604 aa24.95■■□□□ 1.58
SPTSSA-201ENST00000298130 TBL3Q12788 808 aaKnown RBP24.95■■□□□ 1.58
SPTSSA-201ENST00000298130 KYAT1Q16773 422 aa24.95■■□□□ 1.58
SPTSSA-201ENST00000298130 DHDDSQ86SQ9 333 aa24.95■■□□□ 1.58
SPTSSA-201ENST00000298130 NPWQ8N729 165 aa24.95■■□□□ 1.58
SPTSSA-201ENST00000298130 ACMSDQ8TDX5 336 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms