RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 GPRASP2Q96D09 838 aa15.21■□□□□ 0.02
SPIDR-201ENST00000297423 BTBD9Q96Q07 612 aa15.21■□□□□ 0.02
SPIDR-201ENST00000297423 CIDEBQ9UHD4 219 aa15.21■□□□□ 0.02
SPIDR-201ENST00000297423 AGRPO00253 132 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 MAFGO15525 162 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 HMGCRP04035 888 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 PTPN1P18031 435 aaKnown RBP15.2■□□□□ 0.02
SPIDR-201ENST00000297423 GTF2BQ00403 316 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 ZNF699Q32M78 642 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 HSF5Q4G112 596 aaPredicted RBP15.2■□□□□ 0.02
SPIDR-201ENST00000297423 MAP1SQ66K74 1059 aaPredicted RBP15.2■□□□□ 0.02
SPIDR-201ENST00000297423 DENND1BQ6P3S1 775 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 NUP93Q8N1F7 819 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 SPATA6LQ8N4H0 392 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 ATP6V0A1Q93050 837 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 CCDC90BQ9GZT6 254 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 SSU72Q9NP77 194 aaKnown RBP15.2■□□□□ 0.02
SPIDR-201ENST00000297423 CISHQ9NSE2 258 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 PAK5Q9P286 719 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 ARFGEF1Q9Y6D6 1849 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 ZNF839A8K0R7 811 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 TMX2-CTNND1H3BSU7 103 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 TIPRLO75663 272 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 TFDP2Q14188 446 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 NR1D2Q14995 579 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 CES4AQ5XG92 561 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 VSIG10LQ86VR7 867 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 TMCO5AQ8N6Q1 288 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 C7orf31Q8N865 590 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 SLC35B2Q8TB61 432 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 MAML3Q96JK9 1138 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 ADNPQ9H2P0 1102 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 TMEM216Q9P0N5 145 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 A0A1W2PPW3 197 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 LRCH4O75427 683 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 CDH2P19022 906 aaPredicted RBP15.2■□□□□ 0.02
SPIDR-201ENST00000297423 PIK3R1P27986 724 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 YAP1P46937 504 aaKnown RBP15.2■□□□□ 0.02
SPIDR-201ENST00000297423 POU5F1BQ06416 359 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 SCARA3Q6AZY7 606 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 NCSTNQ92542 709 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 PIF1Q9H611 641 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 TASP1Q9H6P5 420 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 CDC14AQ9UNH5 594 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 PCDHA10Q9Y5I2 948 aa15.2■□□□□ 0.02
SPIDR-201ENST00000297423 S100BP04271 92 aaPredicted RBP15.19■□□□□ 0.02
SPIDR-201ENST00000297423 CD1EP15812 388 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 ARL1P40616 181 aaPredicted RBP15.19■□□□□ 0.02
SPIDR-201ENST00000297423 ABCE1P61221 599 aaKnown RBP15.19■□□□□ 0.02
SPIDR-201ENST00000297423 SLC18A2Q05940 514 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 MYBPC2Q14324 1141 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 IL23RQ5VWK5 629 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 PACS1Q6VY07 963 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 EEPD1Q7L9B9 569 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 TMEM110Q86TL2 294 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 EXOC8Q8IYI6 725 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 OFCC1Q8IZS5 231 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 EFHD1Q9BUP0 239 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 OSBPL6Q9BZF3 934 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 SPATC1LQ9H0A9 340 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 POLR1BQ9H9Y6 1135 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 C6orf203Q9P0P8 240 aaPredicted RBP15.19■□□□□ 0.02
SPIDR-201ENST00000297423 DAPK2Q9UIK4 370 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 TLK1Q9UKI8 766 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 GMEB1Q9Y692 573 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 CST3P01034 146 aaPredicted RBP15.19■□□□□ 0.02
SPIDR-201ENST00000297423 PSAPP07602 524 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 MPSTP25325 297 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 HMOX2P30519 316 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 GARSP41250 739 aaKnown RBP15.19■□□□□ 0.02
SPIDR-201ENST00000297423 SNAPC2Q13487 334 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 ACTRT2Q8TDY3 377 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 DNAJB4Q9UDY4 337 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 RFPL1O75677 317 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 CDH3P22223 829 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 MMP8P22894 467 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 CPOXP36551 454 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 HALP42357 657 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 WNT7BP56706 349 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 ADGRE1Q14246 886 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 TMEM53Q6P2H8 277 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 SLC7A5P1Q8MH63 180 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 EXT2Q93063 718 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 CNDP1Q96KN2 507 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 GPATCH1Q9BRR8 931 aaKnown RBP15.19■□□□□ 0.02
SPIDR-201ENST00000297423 CCDC167Q9P0B6 97 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 SLC39A10Q9ULF5 831 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 CDY2AQ9Y6F7 541 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 CDY1Q9Y6F8 540 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 SF3B1O75533 1304 aaKnown RBP eCLIP15.19■□□□□ 0.028e-7■■■■■ 141.1
SPIDR-201ENST00000297423 SMCHD1A6NHR9 2005 aa15.19■□□□□ 0.02
SPIDR-201ENST00000297423 GLRA3O75311 464 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 SPAG6O75602 509 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 MT-ND1P03886 318 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 PPIL2Q13356 520 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 DLG2Q15700 870 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 NFIL3Q16649 462 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 TEDDM1Q5T9Z0 273 aa15.18■□□□□ 0.02
SPIDR-201ENST00000297423 MTG1Q9BT17 334 aaPredicted RBP15.18■□□□□ 0.02
SPIDR-201ENST00000297423 CYP26B1Q9NR63 512 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms