RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 NCKAP1LP55160 1127 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 GRIK3Q13003 919 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 COLEC11Q9BWP8 271 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 UBE2OQ9C0C9 1292 aaKnown RBP15.74■□□□□ 0.11
FNDC1-201ENST00000297267 SPRTNQ9H040 489 aaPredicted RBP15.74■□□□□ 0.11
FNDC1-201ENST00000297267 ATP6AP2A0A1C7CYW4 349 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 DNALI1O14645 258 aaPredicted RBP15.74■□□□□ 0.11
FNDC1-201ENST00000297267 ATP6AP2O75787 350 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 TNNI3P19429 210 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 KLRC2P26717 231 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 SEMA5AQ13591 1074 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 CCNG2Q16589 344 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 RBM23Q86U06 439 aaKnown RBP15.74■□□□□ 0.11
FNDC1-201ENST00000297267 STK32CQ86UX6 486 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 PAWRQ96IZ0 340 aaKnown RBP15.74■□□□□ 0.11
FNDC1-201ENST00000297267 TM6SF2Q9BZW4 377 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 ACOT9Q9Y305 439 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 PDZK1P1A8MUH7 402 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 FFAR2O15552 330 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 PEX11AO75192 247 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 KBTBD12Q3ZCT8 623 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 CASP10Q92851 521 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 CDCA5Q96FF9 252 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 SOX13Q9UN79 622 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 EFCAB14O75071 495 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 CXCL9Q07325 125 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 ZNF57Q68EA5 555 aaPredicted RBP15.74■□□□□ 0.11
FNDC1-201ENST00000297267 DENND1CQ8IV53 801 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 GPR156Q8NFN8 814 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 MAGEE2Q8TD90 523 aaPredicted RBP15.74■□□□□ 0.11
FNDC1-201ENST00000297267 PCDH12Q9NPG4 1184 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 ETNK2Q9NVF9 386 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 KIF1CO43896 1103 aaKnown RBP15.74■□□□□ 0.11
FNDC1-201ENST00000297267 ELF3P78545 371 aaPredicted RBP15.74■□□□□ 0.11
FNDC1-201ENST00000297267 COX10Q12887 443 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 STX5Q13190 355 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 TNIP2Q8NFZ5 429 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 PDCD2LQ9BRP1 358 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 DPY30Q9C005 99 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 SPATA2Q9UM82 520 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 BARX2Q9UMQ3 279 aaPredicted RBP15.74■□□□□ 0.11
FNDC1-201ENST00000297267 TNS2Q63HR2 1409 aa15.74■□□□□ 0.11
FNDC1-201ENST00000297267 SLC15A2Q16348 729 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 MIIPQ5JXC2 388 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 OVOS1Q6IE37 1185 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 KBTBD2Q8IY47 623 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 CLPTM1LQ96KA5 538 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 LPIN3Q9BQK8 851 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 RMND5AQ9H871 391 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 LYVE1Q9Y5Y7 322 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 SPAG6O75602 509 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 HNRNPLP14866 589 aaKnown RBP eCLIP15.73■□□□□ 0.11
FNDC1-201ENST00000297267 PIK3CGP48736 1102 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 LAMB3Q13751 1172 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 CCDC149Q6ZUS6 474 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 KIAA0319LQ8IZA0 1049 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 IL31RAQ8NI17 732 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 AENQ8WTP8 325 aaKnown RBP15.73■□□□□ 0.11
FNDC1-201ENST00000297267 GLT1D1Q96MS3 346 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 ULBP1Q9BZM6 244 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 GOLGA2P5Q9HBQ8 144 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 STARD7Q9NQZ5 370 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 EGFL7Q9UHF1 273 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 TMX2Q9Y320 296 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 PCDHA3Q9Y5H8 950 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 KRT36O76013 467 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 NFKB1P19838 968 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 FUT4P22083 530 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 CNSTQ6PJW8 725 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 BBS7Q8IWZ6 715 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 ATP13A1Q9HD20 1204 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 CLEC4AQ9UMR7 237 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 SNX10Q9Y5X0 201 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 RNF225M0QZC1 329 aaPredicted RBP15.73■□□□□ 0.11
FNDC1-201ENST00000297267 EIF2S1P05198 315 aaKnown RBP15.73■□□□□ 0.11
FNDC1-201ENST00000297267 RPL7AP62424 266 aaKnown RBP15.73■□□□□ 0.11
FNDC1-201ENST00000297267 CAVIN3Q969G5 261 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 SH3GL2Q99962 352 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 BLOC1S6Q9UL45 172 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 NR2E3Q9Y5X4 410 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 GTF2A2P52657 109 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 CTBP1Q13363 440 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 RSBN1Q5VWQ0 802 aaPredicted RBP15.73■□□□□ 0.11
FNDC1-201ENST00000297267 FBXO39Q8N4B4 442 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 RIOX1Q9H6W3 641 aa15.73■□□□□ 0.11
FNDC1-201ENST00000297267 PGK1P00558 417 aa15.72■□□□□ 0.11
FNDC1-201ENST00000297267 TCEA1P23193 301 aaKnown RBP15.72■□□□□ 0.11
FNDC1-201ENST00000297267 NOS3P29474 1203 aa15.72■□□□□ 0.11
FNDC1-201ENST00000297267 MRPS35P82673 323 aaKnown RBP15.72■□□□□ 0.11
FNDC1-201ENST00000297267 TBX2Q13207 712 aaPredicted RBP15.72■□□□□ 0.11
FNDC1-201ENST00000297267 CARTPTQ16568 116 aa15.72■□□□□ 0.11
FNDC1-201ENST00000297267 TMEM119Q4V9L6 283 aa15.72■□□□□ 0.11
FNDC1-201ENST00000297267 TIGD7Q6NT04 549 aaPredicted RBP15.72■□□□□ 0.11
FNDC1-201ENST00000297267 GMCL1P1Q8NEA9 526 aa15.72■□□□□ 0.11
FNDC1-201ENST00000297267 PNPT1Q8TCS8 783 aaKnown RBP15.72■□□□□ 0.11
FNDC1-201ENST00000297267 MARCH7Q9H992 704 aa15.72■□□□□ 0.11
FNDC1-201ENST00000297267 ERVK-5Q9HDB9 667 aa15.72■□□□□ 0.11
FNDC1-201ENST00000297267 NCKIPSDQ9NZQ3 722 aa15.72■□□□□ 0.11
FNDC1-201ENST00000297267 OGDHLQ9ULD0 1010 aa15.72■□□□□ 0.11
FNDC1-201ENST00000297267 ACADMP11310 421 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms