RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 TEX28O15482 410 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 TPSB2P20231 275 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 GARSP41250 739 aaKnown RBP15.97■□□□□ 0.15
LSM6-201ENST00000296581 ZNF33AQ06730 810 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 SEMA5AQ13591 1074 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 TPSAB1Q15661 275 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 MSS51Q4VC12 460 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 MS4A13Q5J8X5 152 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 ACBD5Q5T8D3 534 aaPredicted RBP15.97■□□□□ 0.15
LSM6-201ENST00000296581 KLHDC10Q6PID8 442 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 HERC6Q8IVU3 1022 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 PDIK1LQ8N165 341 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 LZTR1Q8N653 840 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 MCUQ8NE86 351 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 ZBED2Q9BTP6 218 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 SLC12A6Q9UHW9 1150 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 HBS1LQ9Y450 684 aaKnown RBP15.97■□□□□ 0.15
LSM6-201ENST00000296581 MTSS1O43312 755 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 TCEA3O75764 348 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 FDFT1P37268 417 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 TUBP50607 506 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 MTA1Q13330 715 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 FAXCQ5TGI0 409 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 KCTD16Q68DU8 428 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 ARHGAP12Q8IWW6 846 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 CCDC13Q8IYE1 715 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 ZBED8Q8IZ13 594 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 C7orf61Q8IZ16 206 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 FAM76AQ8TAV0 307 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 DPF3Q92784 378 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 PGM2Q96G03 612 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 ZNF512Q96ME7 567 aaPredicted RBP15.96■□□□□ 0.15
LSM6-201ENST00000296581 RAD9AQ99638 391 aa15.96■□□□□ 0.15
LSM6-201ENST00000296581 PPARGC1AQ9UBK2 798 aaKnown RBP15.96■□□□□ 0.15
LSM6-201ENST00000296581 H0YHG0 523 aa15.96■□□□□ 0.14
LSM6-201ENST00000296581 ATP5C1P36542 298 aaKnown RBP15.96■□□□□ 0.14
LSM6-201ENST00000296581 SARNPP82979 210 aaKnown RBP15.96■□□□□ 0.14
LSM6-201ENST00000296581 VEPH1Q14D04 833 aa15.96■□□□□ 0.14
LSM6-201ENST00000296581 C6orf118Q5T5N4 469 aa15.96■□□□□ 0.14
LSM6-201ENST00000296581 AFMIDQ63HM1 303 aa15.96■□□□□ 0.14
LSM6-201ENST00000296581 ZNF567Q8N184 647 aa15.96■□□□□ 0.14
LSM6-201ENST00000296581 SH2D3CQ8N5H7 860 aa15.96■□□□□ 0.14
LSM6-201ENST00000296581 RTL3Q8N8U3 475 aaKnown RBP15.96■□□□□ 0.14
LSM6-201ENST00000296581 KLHL23Q8NBE8 558 aa15.96■□□□□ 0.14
LSM6-201ENST00000296581 PHOSPHO2Q8TCD6 241 aa15.96■□□□□ 0.14
LSM6-201ENST00000296581 WDR83Q9BRX9 315 aaKnown RBP15.96■□□□□ 0.14
LSM6-201ENST00000296581 DNMT3LQ9UJW3 386 aa15.96■□□□□ 0.14
LSM6-201ENST00000296581 INSL5Q9Y5Q6 135 aa15.96■□□□□ 0.14
LSM6-201ENST00000296581 ANAPC1Q9H1A4 1944 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 IGLV3-10A0A075B6K4 115 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 PRRG1O14668 218 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 PTPN3P26045 913 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 COG7P83436 770 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 TWF1Q12792 350 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 AUHQ13825 339 aaKnown RBP15.95■□□□□ 0.14
LSM6-201ENST00000296581 NUGGCQ68CJ6 796 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 NAIF1Q69YI7 327 aaPredicted RBP15.95■□□□□ 0.14
LSM6-201ENST00000296581 NLRP14Q86W24 1093 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 SERPINB12Q96P63 405 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 TSGA13Q96PP4 275 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 PRMT1Q99873 361 aaKnown RBP15.95■□□□□ 0.14
LSM6-201ENST00000296581 CENPHQ9H3R5 247 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 TRPM5Q9NZQ8 1165 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 IGSF9Q9P2J2 1179 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 MCM8Q9UJA3 840 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 SHROOM3Q8TF72 1996 aa15.95■□□□□ 0.14
LSM6-201ENST00000296581 MYO18AQ92614 2054 aaKnown RBP15.95■□□□□ 0.14
LSM6-201ENST00000296581 RASGRF2O14827 1237 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 BANF1O75531 89 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 APRTP07741 180 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 CNPP09543 421 aaKnown RBP15.94■□□□□ 0.14
LSM6-201ENST00000296581 PPP3CCP48454 512 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 STAT4Q14765 748 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 PARP6Q2NL67 630 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 HECTD3Q5T447 861 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 EMC10Q5UCC4 262 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 EPS8L3Q8TE67 593 aaKnown RBP15.94■□□□□ 0.14
LSM6-201ENST00000296581 TLCD1Q96CP7 247 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 CELF6Q96J87 481 aaKnown RBP15.94■□□□□ 0.14
LSM6-201ENST00000296581 EIF2B3Q9NR50 452 aaKnown RBP15.94■□□□□ 0.14
LSM6-201ENST00000296581 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.94■□□□□ 0.14
LSM6-201ENST00000296581 SLC4A7Q9Y6M7 1214 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 NEBLO76041 1014 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 HMBSP08397 361 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 TSHRP16473 764 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 RHOQP17081 205 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 IRX1P78414 480 aaPredicted RBP15.94■□□□□ 0.14
LSM6-201ENST00000296581 BBS9Q3SYG4 887 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 TNFAIP8L3Q5GJ75 292 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 ZSCAN18Q8TBC5 510 aaPredicted RBP15.94■□□□□ 0.14
LSM6-201ENST00000296581 PYROXD1Q8WU10 500 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 VAT1Q99536 393 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 ZYG11BQ9C0D3 744 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 SEPT10Q9P0V9 454 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 VANGL2Q9ULK5 521 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 CLUHO75153 1309 aa15.94■□□□□ 0.14
LSM6-201ENST00000296581 DRGXA6NNA5 263 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 KCNK1O00180 336 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 MAGEA3P43357 314 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 EPHB3P54753 998 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms