RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 ANO7Q6IWH7 933 aa12.47□□□□□ -0.41
HMGB2-201ENST00000296503 WDR5BQ86VZ2 330 aa12.47□□□□□ -0.41
HMGB2-201ENST00000296503 VSTM4Q8IW00 320 aa12.47□□□□□ -0.41
HMGB2-201ENST00000296503 AHI1Q8N157 1196 aa12.47□□□□□ -0.41
HMGB2-201ENST00000296503 WFDC5Q8TCV5 224 aa12.47□□□□□ -0.41
HMGB2-201ENST00000296503 ERLEC1Q96DZ1 483 aa12.47□□□□□ -0.41
HMGB2-201ENST00000296503 MCEEQ96PE7 176 aa12.47□□□□□ -0.41
HMGB2-201ENST00000296503 RASSF4Q9H2L5 321 aa12.47□□□□□ -0.41
HMGB2-201ENST00000296503 PARVAQ9NVD7 372 aa12.47□□□□□ -0.41
HMGB2-201ENST00000296503 TRMT1Q9NXH9 659 aaKnown RBP12.47□□□□□ -0.41
HMGB2-201ENST00000296503 CACNA2D2Q9NY47 1150 aa12.47□□□□□ -0.41
HMGB2-201ENST00000296503 KIAA1522Q9P206 1035 aaPredicted RBP12.47□□□□□ -0.41
HMGB2-201ENST00000296503 BCCIPQ9P287 314 aaKnown RBP eCLIP12.47□□□□□ -0.41
HMGB2-201ENST00000296503 THAP10Q9P2Z0 257 aaPredicted RBP12.47□□□□□ -0.41
HMGB2-201ENST00000296503 CCDC163A0A0D9SF12 145 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 ERICH4A6NGS2 130 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 ZSCAN12O43309 604 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 HRO43593 1189 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 LILRB5O75023 590 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 LUC7L3O95232 432 aaKnown RBP12.46□□□□□ -0.41
HMGB2-201ENST00000296503 LMNAP02545 664 aaKnown RBP12.46□□□□□ -0.41
HMGB2-201ENST00000296503 ATP5BP06576 529 aaKnown RBP12.46□□□□□ -0.41
HMGB2-201ENST00000296503 CNR2P34972 360 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 PTPN9P43378 593 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 RPL7AP62424 266 aaKnown RBP12.46□□□□□ -0.41
HMGB2-201ENST00000296503 LMAN2Q12907 356 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 TRIM14Q14142 442 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 ARL13BQ3SXY8 428 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 TTC39BQ5VTQ0 682 aaPredicted RBP12.46□□□□□ -0.41
HMGB2-201ENST00000296503 MBLAC2Q68D91 279 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 LRRC31Q6UY01 552 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 SYT10Q6XYQ8 523 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 PRR23BQ6ZRT6 265 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 CEP68Q76N32 757 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 C14orf80Q86SX3 495 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 CIR1Q86X95 450 aaPredicted RBP12.46□□□□□ -0.41
HMGB2-201ENST00000296503 OR8K1Q8NGG5 319 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 OLIG1Q8TAK6 271 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 FAM172AQ8WUF8 416 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 SORCS1Q8WY21 1168 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 IGSF8Q969P0 613 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 ANLNQ9NQW6 1124 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 TMPRSS4Q9NRS4 437 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 RAB23Q9ULC3 237 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 SNX10Q9Y5X0 201 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 STON1Q9Y6Q2 735 aa12.46□□□□□ -0.41
HMGB2-201ENST00000296503 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.46□□□□□ -0.42
HMGB2-201ENST00000296503 TCRBV21S2A2A0A5A6 115 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 NPC1O15118 1278 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 SRGAP2O75044 1071 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 MOCS3O95396 460 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 PLEKP08567 350 aaPredicted RBP12.46□□□□□ -0.42
HMGB2-201ENST00000296503 CHRM1P11229 460 aaPredicted RBP12.46□□□□□ -0.42
HMGB2-201ENST00000296503 DESP17661 470 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 SRSF5Q13243 272 aaKnown RBP12.46□□□□□ -0.42
HMGB2-201ENST00000296503 ZNF177Q13360 481 aaPredicted RBP12.46□□□□□ -0.42
HMGB2-201ENST00000296503 TUBB2AQ13885 445 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 SIM2Q14190 667 aaPredicted RBP12.46□□□□□ -0.42
HMGB2-201ENST00000296503 ZNF234Q14588 700 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 RAB6CQ53S08 254 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 FSCBQ5H9T9 825 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 SCYL2Q6P3W7 929 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 STRADAQ7RTN6 431 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 BNIPLQ7Z465 357 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 KIAA0907Q7Z7F0 614 aaPredicted RBP12.46□□□□□ -0.42
HMGB2-201ENST00000296503 ADIPOR2Q86V24 386 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.46□□□□□ -0.424e-13■□□□□ 11.3
HMGB2-201ENST00000296503 CYB5D2Q8WUJ1 264 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 HNRNPLLQ8WVV9 542 aaKnown RBP12.46□□□□□ -0.42
HMGB2-201ENST00000296503 HMGB4Q8WW32 186 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 C1orf74Q96LT6 269 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 HAPLN3Q96S86 360 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 TUBB2BQ9BVA1 445 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 TPSD1Q9BZJ3 242 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 RAB6CQ9H0N0 254 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 ZNHIT6Q9NWK9 470 aaKnown RBP12.46□□□□□ -0.42
HMGB2-201ENST00000296503 MYO1AQ9UBC5 1043 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 CNOT8Q9UFF9 292 aaKnown RBP12.46□□□□□ -0.42
HMGB2-201ENST00000296503 EBF1Q9UH73 591 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 RAD54BQ9Y620 910 aa12.46□□□□□ -0.42
HMGB2-201ENST00000296503 A0A1B0GVM2 712 aa12.45□□□□□ -0.42
HMGB2-201ENST00000296503 TCRBV5S1A1TA0A578 114 aa12.45□□□□□ -0.42
HMGB2-201ENST00000296503 TCAF2A6NFQ2 919 aa12.45□□□□□ -0.42
HMGB2-201ENST00000296503 ATMINO43313 823 aaPredicted RBP12.45□□□□□ -0.42
HMGB2-201ENST00000296503 GFRA3O60609 400 aa12.45□□□□□ -0.42
HMGB2-201ENST00000296503 IVLP07476 585 aa12.45□□□□□ -0.42
HMGB2-201ENST00000296503 ADRA1BP35368 520 aa12.45□□□□□ -0.42
HMGB2-201ENST00000296503 IL12RB1P42701 662 aa12.45□□□□□ -0.42
HMGB2-201ENST00000296503 ZNF143P52747 638 aaPredicted RBP12.45□□□□□ -0.42
HMGB2-201ENST00000296503 MAMLD1Q13495 774 aa12.45□□□□□ -0.42
HMGB2-201ENST00000296503 STARD3Q14849 445 aa12.45□□□□□ -0.42
HMGB2-201ENST00000296503 FNDC3BQ53EP0 1204 aaKnown RBP12.45□□□□□ -0.42
HMGB2-201ENST00000296503 USP39Q53GS9 565 aaKnown RBP12.45□□□□□ -0.42
HMGB2-201ENST00000296503 ACBD5Q5T8D3 534 aaPredicted RBP12.45□□□□□ -0.42
HMGB2-201ENST00000296503 RNF43Q68DV7 783 aa12.45□□□□□ -0.42
HMGB2-201ENST00000296503 ASCL5Q7RTU5 278 aa12.45□□□□□ -0.42
HMGB2-201ENST00000296503 MNS1Q8NEH6 495 aa12.45□□□□□ -0.42
HMGB2-201ENST00000296503 CENPIQ92674 756 aaPredicted RBP12.45□□□□□ -0.42
HMGB2-201ENST00000296503 ZNF653Q96CK0 615 aa12.45□□□□□ -0.42
HMGB2-201ENST00000296503 TRIM11Q96F44 468 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms