RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 SPATA20Q8TB22 786 aa16.55■□□□□ 0.24
TMEM41A-201ENST00000296254 SKA1Q96BD8 255 aa16.55■□□□□ 0.24
TMEM41A-201ENST00000296254 LRIG1Q96JA1 1093 aa16.55■□□□□ 0.24
TMEM41A-201ENST00000296254 MIS12Q9H081 205 aa16.55■□□□□ 0.24
TMEM41A-201ENST00000296254 NEUROG2Q9H2A3 272 aa16.55■□□□□ 0.24
TMEM41A-201ENST00000296254 METTL14Q9HCE5 456 aaKnown RBP16.55■□□□□ 0.24
TMEM41A-201ENST00000296254 ERVW-1Q9UQF0 538 aa16.55■□□□□ 0.24
TMEM41A-201ENST00000296254 PCDHGA1Q9Y5H4 931 aa16.55■□□□□ 0.24
TMEM41A-201ENST00000296254 NYNRINQ9P2P1 1898 aaKnown RBP16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 EDDM13A0A1B0GTR0 161 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 TARSL2A2RTX5 802 aaKnown RBP16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 TTC34A8MYJ7 566 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 E9PAM4 449 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 SART1O43290 800 aaKnown RBP16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 CALCAP01258 141 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 SRPRAP08240 638 aaKnown RBP16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 CTSOP43234 321 aaPredicted RBP16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 RPL34P49207 117 aaKnown RBP16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 ADPRHP54922 357 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 SHBQ15464 509 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 DCAF6Q58WW2 860 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 TAC4Q86UU9 113 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 TMPRSS12Q86WS5 348 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 GATAD2AQ86YP4 633 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 CCDC117Q8IWD4 279 aaPredicted RBP16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 SCUBE3Q8IX30 993 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 CFAP52Q8N1V2 620 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 AADATQ8N5Z0 425 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 BBC3Q96PG8 261 aaPredicted RBP16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 OMDQ99983 421 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 XPO7Q9UIA9 1087 aaKnown RBP16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 NAALADL1Q9UQQ1 740 aa16.54■□□□□ 0.24
TMEM41A-201ENST00000296254 ENC1O14682 589 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 YKT6O15498 198 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 MOCS3O95396 460 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 MOCS2O96007 188 aaPredicted RBP16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 SLC8A1P32418 973 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 PSMD8P48556 350 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 CCR5P51681 352 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 ECT2LQ008S8 904 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 GCNT1Q02742 428 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 PRAMEF14Q5SWL7 426 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 BEND5Q7L4P6 421 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 LMO3Q8TAP4 145 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 ADAM32Q8TC27 787 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 SAP25Q8TEE9 199 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 FAM149B1Q96BN6 582 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 GDF3Q9NR23 364 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 AASDHPPTQ9NRN7 309 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 TPX2Q9ULW0 747 aaKnown RBP16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 CEP83Q9Y592 693 aa16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 GCN1Q92616 2671 aaKnown RBP16.53■□□□□ 0.24
TMEM41A-201ENST00000296254 A0A1W2PR77 199 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 CBX4O00257 560 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 PSMA7O14818 248 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 WNT9AO14904 365 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 P4HA2O15460 535 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 SMC2O95347 1197 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 ADH1BP00325 375 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 APOEP02649 317 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 GOT1P17174 413 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 ABCB4P21439 1286 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 MZF1P28698 734 aaPredicted RBP16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 CD38P28907 300 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 EPHA8P29322 1005 aaPredicted RBP16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 ELAVL3Q14576 367 aaKnown RBP16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 RNF219Q5W0B1 726 aaPredicted RBP16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 ERCC4Q92889 916 aaPredicted RBP16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 SMARCE1Q969G3 411 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 NXPE2Q96DL1 559 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 CNDP2Q96KP4 475 aaKnown RBP16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 CEP63Q96MT8 703 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 FAM129BQ96TA1 746 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 TRIM62Q9BVG3 475 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 GTPBP4Q9BZE4 634 aaKnown RBP16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 SLCO3A1Q9UIG8 710 aa16.52■□□□□ 0.24
TMEM41A-201ENST00000296254 KALRNO60229 2985 aa16.52■□□□□ 0.23
TMEM41A-201ENST00000296254 KNTC1P50748 2209 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 PLK4O00444 970 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 LATO43561 262 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 RFPL3O75679 317 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 IGLV3-25P01717 112 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 ITGAVP06756 1048 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 C5AR1P21730 350 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 HNF1BP35680 557 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 GPD2P43304 727 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 ACADVLP49748 655 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 STK19P49842 368 aaPredicted RBP16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 NXPH1P58417 271 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 PPP2CBP62714 309 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 PPP2CAP67775 309 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 CETN1Q12798 172 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 DNAJC3Q13217 504 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 CCDC40Q4G0X9 1142 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 SYPL2Q5VXT5 272 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 RAP1GAP2Q684P5 730 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 SND1Q7KZF4 910 aaKnown RBP eCLIP16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 RRAGAQ7L523 313 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 CHSY1Q86X52 802 aa16.51■□□□□ 0.23
TMEM41A-201ENST00000296254 ARHGEF19Q8IW93 802 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms