RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 SPATS1Q496A3 300 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 NPNTQ6UXI9 565 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 MAVSQ7Z434 540 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 TMEM135Q86UB9 458 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 CTAGE3PQ8IX95 158 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 CRYBG2Q8N1P7 616 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 EMC1Q8N766 993 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 DDI1Q8WTU0 396 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 DEPDC1BQ8WUY9 529 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 FAM84AQ96KN4 292 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 TWNKQ96RR1 684 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 TUBGCP5Q96RT8 1024 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 MRPS26Q9BYN8 205 aaKnown RBP6.32□□□□□ -1.4
VCAM1-201ENST00000294728 IL22Q9GZX6 179 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 CDH19Q9H159 772 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 UTP6Q9NYH9 597 aaKnown RBP6.32□□□□□ -1.4
VCAM1-201ENST00000294728 ARMCX1Q9P291 453 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 TJP2Q9UDY2 1190 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 FAM170AA1A519 330 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 USP1O94782 785 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 METTL18O95568 372 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 SLC25A27O95847 323 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 APRTP07741 180 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 ITGA2BP08514 1039 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 ITGAXP20702 1163 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 CYP3A5P20815 502 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 RPL5P46777 297 aaKnown RBP6.32□□□□□ -1.4
VCAM1-201ENST00000294728 LIMK2P53671 638 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 CDC42EP1Q00587 391 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 PDE1BQ01064 536 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 MMRN1Q13201 1228 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 LRIT3Q3SXY7 679 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 PDPK2PQ6A1A2 396 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 RNF111Q6ZNA4 994 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 RASSF3Q86WH2 238 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 CNTD1Q8N815 330 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 GOLM1Q8NBJ4 401 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 RNF149Q8NC42 400 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 FBXO27Q8NI29 283 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 NAT14Q8WUY8 206 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 TFB1MQ8WVM0 346 aaKnown RBP6.32□□□□□ -1.4
VCAM1-201ENST00000294728 HTR3CQ8WXA8 447 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 ZBTB10Q96DT7 871 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 HPDLQ96IR7 371 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 RBBP8Q99708 897 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 GDF15Q99988 308 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 C12orf65Q9H3J6 166 aaKnown RBP6.32□□□□□ -1.4
VCAM1-201ENST00000294728 SMYD3Q9H7B4 428 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 TIMMDC1Q9NPL8 285 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 XPNPEP3Q9NQH7 507 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 ATXN10Q9UBB4 475 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 PCSK1NQ9UHG2 260 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 TSPAN16Q9UKR8 245 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 SARDHQ9UL12 918 aa6.32□□□□□ -1.4
VCAM1-201ENST00000294728 DNAJC25-GNG10A0A024R161 153 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 LACTBL1A8MY62 500 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 PSMD3O43242 534 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 RNASEH1O60930 286 aaKnown RBP6.31□□□□□ -1.4
VCAM1-201ENST00000294728 AVILO75366 819 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 POLBP06746 335 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 C6orf222P0C671 652 aaPredicted RBP6.31□□□□□ -1.4
VCAM1-201ENST00000294728 STAG3L1P0CL83 205 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 SPRP35270 261 aaPredicted RBP6.31□□□□□ -1.4
VCAM1-201ENST00000294728 PEX19P40855 299 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 GRM5P41594 1212 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 SCAPQ12770 1279 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 IRF5Q13568 498 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 APOFQ13790 326 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 ZBTB6Q15916 424 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 DCAF4L1Q3SXM0 396 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 HSP90AA5PQ58FG0 334 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 N4BP2L1Q5TBK1 243 aaPredicted RBP6.31□□□□□ -1.4
VCAM1-201ENST00000294728 NCBP2-AS2Q69YL0 99 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 HEATR6Q6AI08 1181 aaKnown RBP6.31□□□□□ -1.4
VCAM1-201ENST00000294728 RIN3Q8TB24 985 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 PXYLP1Q8TE99 480 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 LRCH3Q96II8 777 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 PRICKLE1Q96MT3 831 aaPredicted RBP6.31□□□□□ -1.4
VCAM1-201ENST00000294728 FAM210AQ96ND0 272 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 PPP1R2P1Q96PQ5 205 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 CSPG4P5Q96PW8 444 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 VAT1Q99536 393 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 TCHPQ9BT92 498 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 MECRQ9BV79 373 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 PCMTD2Q9NV79 361 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 THEGQ9P2T0 379 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 PHF24Q9UPV7 400 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 DNAJC16Q9Y2G8 782 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.31□□□□□ -1.4
VCAM1-201ENST00000294728 RGSL1A5PLK6 1076 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 SOWAHBA6NEL2 793 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 ZNF701M0R085 212 aaPredicted RBP6.31□□□□□ -1.4
VCAM1-201ENST00000294728 MAP3K13O43283 966 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 TIMM44O43615 452 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 CACNG3O60359 315 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 FBXO21O94952 628 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 C22orf31O95567 290 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 NFICP08651 508 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 RALBP11234 206 aa6.31□□□□□ -1.4
VCAM1-201ENST00000294728 COX4I1P13073 169 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms