RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 NYNRINQ9P2P1 1898 aaKnown RBP9.4□□□□□ -0.91
PDPN-201ENST00000294489 GOLGA6L7A0A1B0GV03 622 aa9.4□□□□□ -0.91
PDPN-201ENST00000294489 WDR27A2RRH5 827 aa9.4□□□□□ -0.91
PDPN-201ENST00000294489 TRDMT1O14717 391 aaKnown RBP9.4□□□□□ -0.91
PDPN-201ENST00000294489 IGLV3-27P01718 113 aa9.4□□□□□ -0.91
PDPN-201ENST00000294489 CSF2RAP15509 400 aa9.4□□□□□ -0.91
PDPN-201ENST00000294489 MPP2Q14168 576 aa9.4□□□□□ -0.91
PDPN-201ENST00000294489 EFTUD2Q15029 972 aaKnown RBP eCLIP9.4□□□□□ -0.91
PDPN-201ENST00000294489 FAM182AQ5T1J6 154 aa9.4□□□□□ -0.91
PDPN-201ENST00000294489 PRSS55Q6UWB4 352 aaPredicted RBP9.4□□□□□ -0.91
PDPN-201ENST00000294489 YTHDF3Q7Z739 585 aaKnown RBP9.4□□□□□ -0.91
PDPN-201ENST00000294489 DDX53Q86TM3 631 aaKnown RBP9.4□□□□□ -0.91
PDPN-201ENST00000294489 SCN4BQ8IWT1 228 aa9.4□□□□□ -0.91
PDPN-201ENST00000294489 ZNF683Q8IZ20 524 aa9.4□□□□□ -0.91
PDPN-201ENST00000294489 TMEM199Q8N511 208 aa9.4□□□□□ -0.91
PDPN-201ENST00000294489 GDAP1Q8TB36 358 aa9.4□□□□□ -0.91
PDPN-201ENST00000294489 OVCA2Q8WZ82 227 aa9.4□□□□□ -0.91
PDPN-201ENST00000294489 SSU72Q9NP77 194 aaKnown RBP9.4□□□□□ -0.91
PDPN-201ENST00000294489 IL23AQ9NPF7 189 aa9.4□□□□□ -0.91
PDPN-201ENST00000294489 MAD1L1Q9Y6D9 718 aa9.4□□□□□ -0.91
PDPN-201ENST00000294489 DENND4CQ5VZ89 1909 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 ADAM12O43184 909 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 MTSS1O43312 755 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 SPAG7O75391 227 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 MLNP12872 115 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 LAG3P18627 525 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 ATF6P18850 670 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 KRT4P19013 534 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 CA4P22748 312 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 EPHB2P29323 1055 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 LBX1P52954 281 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 RPL10AP62906 217 aaKnown RBP9.39□□□□□ -0.91
PDPN-201ENST00000294489 HTRA4P83105 476 aaPredicted RBP9.39□□□□□ -0.91
PDPN-201ENST00000294489 ZNF33AQ06730 810 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 PARP6Q2NL67 630 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 KBTBD12Q3ZCT8 623 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 C4orf33Q8N1A6 199 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 OTUD6BQ8N6M0 293 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 CCDC197Q8NCU1 140 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 ALKBH8Q96BT7 664 aaKnown RBP9.39□□□□□ -0.91
PDPN-201ENST00000294489 FCRL2Q96LA5 508 aaPredicted RBP9.39□□□□□ -0.91
PDPN-201ENST00000294489 MAGEB18Q96M61 343 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 ZNF558Q96NG5 402 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 SERPINB11Q96P15 392 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 CLSTN3Q9BQT9 956 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 EIF2B3Q9NR50 452 aaKnown RBP9.39□□□□□ -0.91
PDPN-201ENST00000294489 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.39□□□□□ -0.91
PDPN-201ENST00000294489 MRPL42Q9Y6G3 142 aaKnown RBP9.39□□□□□ -0.91
PDPN-201ENST00000294489 WASH4PA8MWX3 477 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 TCP11X1B4DZS4 312 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 LILRB3O75022 631 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 YWHAQP27348 245 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 MAGEA3P43357 314 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 CORO7P57737 925 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 IFT88Q13099 833 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 SPARCL1Q14515 664 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 SEPT7Q16181 437 aaKnown RBP9.39□□□□□ -0.91
PDPN-201ENST00000294489 PSMD5Q16401 504 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 LGSNQ5TDP6 509 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 AFMIDQ63HM1 303 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 TPGS2Q68CL5 300 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 C16orf59Q7L2K0 433 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 CTAGE3PQ8IX95 158 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 DCAKDQ8WVC6 231 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 SLC44A1Q8WWI5 657 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 PGLYRP2Q96PD5 576 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 EBNA1BP2Q99848 306 aaKnown RBP9.39□□□□□ -0.91
PDPN-201ENST00000294489 PAIP2Q9BPZ3 127 aaKnown RBP9.39□□□□□ -0.91
PDPN-201ENST00000294489 KIF9Q9HAQ2 790 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 OLA1Q9NTK5 396 aaKnown RBP9.39□□□□□ -0.91
PDPN-201ENST00000294489 GMIPQ9P107 970 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 KLHL8Q9P2G9 620 aaPredicted RBP9.39□□□□□ -0.91
PDPN-201ENST00000294489 STK39Q9UEW8 545 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 NR2E3Q9Y5X4 410 aa9.39□□□□□ -0.91
PDPN-201ENST00000294489 MYO1CO00159 1063 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 LRIG2O94898 1065 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 APOEP02649 317 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 CPB1P15086 417 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 CCR1P32246 355 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 GALNT2Q10471 571 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 SDHAF4Q5VUM1 108 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 NUGGCQ68CJ6 796 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 PID1Q7Z2X4 250 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 SLC26A11Q86WA9 606 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 LRRC6Q86X45 466 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 KLHDC8BQ8IXV7 354 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 TGS1Q96RS0 853 aaKnown RBP9.38□□□□□ -0.91
PDPN-201ENST00000294489 FNIP2Q9P278 1114 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 AFF4Q9UHB7 1163 aaKnown RBP9.38□□□□□ -0.91
PDPN-201ENST00000294489 CDY1Q9Y6F8 540 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 CHD5Q8TDI0 1954 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 A0A1W2PPM1 405 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 SLC38A8A6NNN8 435 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 PIAS1O75925 651 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 UPP2O95045 317 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 ZWINTO95229 277 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 MT-ND3P03897 115 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 PPIDQ08752 370 aaKnown RBP9.38□□□□□ -0.91
PDPN-201ENST00000294489 WASHC5Q12768 1159 aa9.38□□□□□ -0.91
PDPN-201ENST00000294489 ACBD5Q5T8D3 534 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 276.1 ms