RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 INPP4AQ96PE3 977 aaPredicted RBP15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 MRPS26Q9BYN8 205 aaKnown RBP15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 DPY30Q9C005 99 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 PHACTR1Q9C0D0 580 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 DUSP12Q9UNI6 340 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 BTNL10A8MVZ5 291 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 FAM25AB3EWG3 89 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 FAM25CB3EWG5 89 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 FAM25GB3EWG6 89 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 FAM155BO75949 473 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 FMO4P31512 558 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 GLB1LQ6UWU2 654 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 KYAT3Q6YP21 454 aaKnown RBP15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 FBXO39Q8N4B4 442 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 FBXO30Q8TB52 745 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 SENP6Q9GZR1 1112 aaPredicted RBP15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 CLPBQ9H078 707 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 ATAD3AQ9NVI7 634 aa15.63■□□□□ 0.09
SHROOM4-201ENST00000289292 IQCA1LA6NCM1 817 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 CBX4O00257 560 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 TAF4O00268 1085 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 GAS2O43903 313 aaKnown RBP15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 SKIV2L2P42285 1042 aaKnown RBP15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 NPY2RP49146 381 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 OXCT1P55809 520 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 ST8SIA6P61647 398 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 TYW3Q6IPR3 259 aaKnown RBP15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 ZNF662Q6ZS27 426 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 FAM183BPQ6ZVS7 135 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 MARK2Q7KZI7 788 aaKnown RBP15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 KBTBD2Q8IY47 623 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 ALG3Q92685 438 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 SLC12A8A0AV02 714 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 TRIM43BA6NCK2 446 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 CCR1P32246 355 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 RGS2P41220 211 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 EIF1ADQ8N9N8 165 aaKnown RBP15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 GPRC5AQ8NFJ5 357 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 TSPAN14Q8NG11 270 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 SPOCK2Q92563 424 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 LENG1Q96BZ8 264 aaPredicted RBP15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 LRRC19Q9H756 370 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 SALL4Q9UJQ4 1053 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 ANKRD6Q9Y2G4 727 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 ZC3H12AQ5D1E8 599 aaKnown RBP15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 NANOGNBQ7Z5D8 188 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 C10orf107Q8IVU9 208 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 MED8Q96G25 268 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 VCPIP1Q96JH7 1222 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 GGA2Q9UJY4 613 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 ITGA11Q9UKX5 1188 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 DSEQ9UL01 958 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 TCRBV7S2A1N4TA0A589 114 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 TRDMT1O14717 391 aaKnown RBP15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 DDX3YO15523 660 aaKnown RBP15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 CNOT3O75175 753 aaKnown RBP15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 RPL7AP62424 266 aaKnown RBP15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 NR1D2Q14995 579 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 AMIGO2Q86SJ2 522 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 C19orf18Q8NEA5 215 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 GSTCDQ8NEC7 633 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 SLC2A14Q8TDB8 520 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 WDR18Q9BV38 432 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 HDHD2Q9H0R4 259 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 CYP3A43Q9HB55 503 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 KCNMB3Q9NPA1 279 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 TBC1D13Q9NVG8 400 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 COPG2Q9UBF2 871 aa15.62■□□□□ 0.09
SHROOM4-201ENST00000289292 A8MX80 341 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 DPEP1P16444 411 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 MMP13P45452 471 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 MAP4K3Q8IVH8 894 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 ITFG1Q8TB96 612 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 PIWIL2Q8TC59 973 aaKnown RBP15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 SPPL2AQ8TCT8 520 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 OSCP1Q8WVF1 389 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 NDNQ99608 321 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 ALG9Q9H6U8 611 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 PNPOQ9NVS9 261 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 ALOX15P16050 662 aaPredicted RBP15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 HK2P52789 917 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 BACE1P56817 501 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 SLC6A3Q01959 620 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 ZNF484Q5JVG2 852 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 IRF2BP1Q8IU81 584 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 RRN3Q9NYV6 651 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 NUDT5Q9UKK9 219 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 VPS9D1Q9Y2B5 631 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 ATXN2Q99700 1313 aaKnown RBP15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 DDR1Q08345 913 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 HIST2H2ACQ16777 129 aaPredicted RBP15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 TTLL9Q3SXZ7 439 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 FBXO47Q5MNV8 452 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 HIST2H2AA3Q6FI13 130 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 MAML3Q96JK9 1138 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 ZMYND8Q9ULU4 1186 aaPredicted RBP15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 A0A1B0GW55 424 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 RRN3P2A6NIE6 340 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 TRUB2O95900 331 aaKnown RBP15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 DUX4L2P0CJ85 424 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms