RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 TBCCQ15814 346 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 CRYGNQ8WXF5 182 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 CLPTM1LQ96KA5 538 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 LPIN3Q9BQK8 851 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 NTPCRQ9BSD7 190 aaKnown RBP12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 PRR23D1E9PI22 279 aaPredicted RBP12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 PHGDHO43175 533 aaKnown RBP12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 ADCY6O43306 1168 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 PRR23D2P0DMB1 279 aaPredicted RBP12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 FDFT1P37268 417 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 ABCE1P61221 599 aaKnown RBP12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 OR8H2Q8N162 312 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 TMEM109Q9BVC6 243 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 GOLGA2P5Q9HBQ8 144 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 CASS4Q9NQ75 786 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 CHKBQ9Y259 395 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 COL18A1P39060 1754 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 ATRNL1Q5VV63 1379 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 ADAMTSL3P82987 1691 aa12.82□□□□□ -0.36
SLC6A1-201ENST00000287766 KPNA4O00629 521 aaPredicted RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 TPP1O14773 563 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 TMEM63AO94886 807 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 CDH2P19022 906 aaPredicted RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 PSMA4P25789 261 aaKnown RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 IL1R2P27930 398 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 GNASQ5JWF2 1037 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 PRAMEF19Q5SWL8 479 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 CCDC149Q6ZUS6 474 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 PPHLN1Q8NEY8 458 aaKnown RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 OR52K1Q8NGK4 314 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 ZSCAN18Q8TBC5 510 aaPredicted RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 RMDN1Q96DB5 314 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 KLRG1Q96E93 195 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 ROGDIQ9GZN7 287 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 NMUR2Q9GZQ4 415 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 COPS7BQ9H9Q2 264 aaPredicted RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 EML4Q9HC35 981 aaKnown RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 ITGA11Q9UKX5 1188 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 RBMX2Q9Y388 322 aaKnown RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 CLDN5O00501 218 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 ASNA1O43681 348 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 ADORA2AP29274 412 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 ATXN1P54253 815 aaKnown RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 MRPS22P82650 360 aaKnown RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 MGAT5Q09328 741 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 MPP3Q13368 585 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 BFSP2Q13515 415 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 PDPK2PQ6A1A2 396 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 CLNKQ7Z7G1 428 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 TTC7BQ86TV6 843 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 XYLT1Q86Y38 959 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 GIPC3Q8TF64 312 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 C18orf25Q96B23 403 aaPredicted RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 MRPL45Q9BRJ2 306 aaKnown RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 NRDE2Q9H7Z3 1164 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 TRIM39Q9HCM9 518 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 VANGL2Q9ULK5 521 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 PRG3Q9Y2Y8 225 aaPredicted RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 COMMD3-BMI1R4GMX3 469 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 CACNA1SQ13698 1873 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 C5orf60A6NFR6 353 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 DDHD2O94830 711 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 ALADP13716 330 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 ARL2P36404 184 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 PLK1P53350 603 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 YWHAZP63104 245 aaKnown RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 POU5F1Q01860 360 aaKnown RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 SLC5A9Q2M3M2 681 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 CMC1Q7Z7K0 106 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 TMEM130Q8N3G9 435 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 CDCA5Q96FF9 252 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 LRRC40Q9H9A6 602 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 NSMCE4AQ9NXX6 385 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 ATXN10Q9UBB4 475 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 TNFSF13BQ9Y275 285 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 N4BP2Q86UW6 1770 aaPredicted RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 CLOCKO15516 846 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 CWF19L1Q69YN2 538 aaKnown RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 C6orf89Q6UWU4 347 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 CYP2R1Q6VVX0 501 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 RBM44Q6ZP01 1051 aaKnown RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 DDX1Q92499 740 aaKnown RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 CEP44Q9C0F1 390 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 MRGBPQ9NV56 204 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 DCDC2Q9UHG0 476 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 ZMYND8Q9ULU4 1186 aaPredicted RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 TIAM2Q8IVF5 1701 aa12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 SIPA1L3O60292 1781 aaPredicted RBP12.81□□□□□ -0.36
SLC6A1-201ENST00000287766 A0A096LPK6 155 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 NBNO60934 754 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 F7P08709 466 aaPredicted RBP12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 SLC26A2P50443 739 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 RPS6KA3P51812 740 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 WNT7BP56706 349 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 ZNF618Q5T7W0 954 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 KIAA1841Q6NSI8 718 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 MIB1Q86YT6 1006 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 SPATA2LQ8IUW3 424 aaPredicted RBP12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 C2orf69Q8N8R5 385 aa12.8□□□□□ -0.36
SLC6A1-201ENST00000287766 SLC16A10Q8TF71 515 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms