RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 ALOX15BO15296 676 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 NBNO60934 754 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 APOEP02649 317 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 CLTBP09497 229 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 PCNAP12004 261 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 ATP2A2P16615 1042 aaKnown RBP7.78□□□□□ -1.16
TRIM42-201ENST00000286349 AKAP5P24588 427 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 CSTF2P33240 577 aaKnown RBP eCLIP7.78□□□□□ -1.16
TRIM42-201ENST00000286349 ETFBP38117 255 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 ARL4CP56559 192 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 EIF3EP60228 445 aaKnown RBP7.78□□□□□ -1.16
TRIM42-201ENST00000286349 ROR1Q01973 937 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 NOMO1Q15155 1222 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 NDUFA5Q16718 116 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 KYNUQ16719 465 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 GLRA4Q5JXX5 417 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 TUBA3EQ6PEY2 450 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 TDRPQ86YL5 185 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 PSTKQ8IV42 348 aaKnown RBP7.78□□□□□ -1.16
TRIM42-201ENST00000286349 ADGRF2Q8IZF7 708 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 ZNF473Q8WTR7 871 aaKnown RBP7.78□□□□□ -1.16
TRIM42-201ENST00000286349 IPCEF1Q8WWN9 437 aaPredicted RBP7.78□□□□□ -1.16
TRIM42-201ENST00000286349 SCLYQ96I15 445 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 RNF157Q96PX1 679 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 XPO6Q96QU8 1125 aaKnown RBP7.78□□□□□ -1.16
TRIM42-201ENST00000286349 SERINC2Q96SA4 455 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 FAM118BQ9BPY3 351 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 SELENOSQ9BQE4 189 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 DDX23Q9BUQ8 820 aaKnown RBP7.78□□□□□ -1.16
TRIM42-201ENST00000286349 APOL6Q9BWW8 343 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 HIPK3Q9H422 1215 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 UBN1Q9NPG3 1134 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 PPANQ9NQ55 473 aaKnown RBP7.78□□□□□ -1.16
TRIM42-201ENST00000286349 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.78□□□□□ -1.16
TRIM42-201ENST00000286349 TMEM39AQ9NV64 488 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 SENP1Q9P0U3 644 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 DSEQ9UL01 958 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 HES2Q9Y543 173 aa7.78□□□□□ -1.16
TRIM42-201ENST00000286349 PDCD11Q14690 1871 aaKnown RBP7.77□□□□□ -1.16
TRIM42-201ENST00000286349 CCDC163A0A0D9SF12 145 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 SPECC1L-ADORA2AF8WAN1 911 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 APOL1O14791 398 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 PPEF2O14830 753 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 XPO1O14980 1071 aaKnown RBP7.77□□□□□ -1.17
TRIM42-201ENST00000286349 GPR182O15218 404 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 NVLO15381 856 aaKnown RBP7.77□□□□□ -1.17
TRIM42-201ENST00000286349 MAP3K6O95382 1288 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 IFNB1P01574 187 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 GSTT2P0CG29 244 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 GSTT2BP0CG30 244 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 GLULP15104 373 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 CHN1P15882 459 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 SERPINB8P50452 374 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 CCL23P55773 120 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 DYNLT1P63172 113 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 CBLBQ13191 982 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 DPYSL3Q14195 570 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 LPIN1Q14693 890 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 HIF1AQ16665 826 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 ANKDD1AQ495B1 522 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 CEP78Q5JTW2 689 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 METTL11BQ5VVY1 283 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 STRADAQ7RTN6 431 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 FUKQ8N0W3 1084 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 TMEM86AQ8N2M4 240 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 SMG8Q8ND04 991 aaKnown RBP7.77□□□□□ -1.17
TRIM42-201ENST00000286349 SPATA18Q8TC71 538 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 FAM172AQ8WUF8 416 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 KBTBD7Q8WVZ9 684 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 PRCCQ92733 491 aaPredicted RBP7.77□□□□□ -1.17
TRIM42-201ENST00000286349 ACSF2Q96CM8 615 aaPredicted RBP7.77□□□□□ -1.17
TRIM42-201ENST00000286349 NRBF2Q96F24 287 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 SAMD11Q96NU1 681 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 PPP1R12CQ9BZL4 782 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 SAYSD1Q9NPB0 183 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 PCDH12Q9NPG4 1184 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 FAM49BQ9NUQ9 324 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 INTS9Q9NV88 658 aaKnown RBP7.77□□□□□ -1.17
TRIM42-201ENST00000286349 FARP1Q9Y4F1 1045 aaPredicted RBP7.77□□□□□ -1.17
TRIM42-201ENST00000286349 C5orf60A6NFR6 353 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 SMIM23A6NLE4 172 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 PAPSS1O43252 624 aaPredicted RBP7.77□□□□□ -1.17
TRIM42-201ENST00000286349 IDH3BO43837 385 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 SELPP16109 830 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 CASP2P42575 452 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 HAAOP46952 286 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 LHX1P48742 406 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 NR2C2P49116 596 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 ACADVLP49748 655 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 RGS7P49802 495 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 LILRA4P59901 499 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 NIPAL4Q0D2K0 466 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 SPIDRQ14159 915 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 ZNF600Q6ZNG1 722 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 CAND1Q86VP6 1230 aaKnown RBP7.77□□□□□ -1.17
TRIM42-201ENST00000286349 TEX19Q8NA77 164 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 KCTD13Q8WZ19 329 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 CENPIQ92674 756 aaPredicted RBP7.77□□□□□ -1.17
TRIM42-201ENST00000286349 FAF2Q96CS3 445 aa7.77□□□□□ -1.17
TRIM42-201ENST00000286349 CHMP6Q96FZ7 201 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms