RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 DEPDC5O75140 1603 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 H3BQF6 201 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 SLC37A4O43826 429 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 SERPINF2P08697 491 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 VAV1P15498 845 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 NPTX2P47972 431 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 BCAP31P51572 246 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 GTF2A2P52657 109 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 BRINP3Q76B58 766 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 CBWD2Q8IUF1 395 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 MCOLN2Q8IZK6 566 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF557Q8N988 423 aaPredicted RBP8.13□□□□□ -1.11
LIMD1-201ENST00000273317 CENPIQ92674 756 aaPredicted RBP8.13□□□□□ -1.11
LIMD1-201ENST00000273317 TMEM176AQ96HP8 235 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 TMEM121Q9BTD3 319 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 ETAA1Q9NY74 926 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 WDR27A2RRH5 827 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 ALOX12P18054 663 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 LRPAP1P30533 357 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 CCR1P32246 355 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 ARCQ7LC44 396 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 DEPDC4Q8N2C3 294 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 MCCC1Q96RQ3 725 aaPredicted RBP8.13□□□□□ -1.11
LIMD1-201ENST00000273317 RACGAP1Q9H0H5 632 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 TRPC4Q9UBN4 977 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 CAPN6Q9Y6Q1 641 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 VWDEQ8N2E2 1590 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 CBFA2T3O75081 653 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 CPSF4O95639 269 aaKnown RBP8.13□□□□□ -1.11
LIMD1-201ENST00000273317 ALOX5P09917 674 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 CCDC130P13994 396 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 CSNK2BP67870 215 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 BNIP2Q12982 314 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 DPYSQ14117 519 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF268Q14587 947 aaPredicted RBP8.13□□□□□ -1.11
LIMD1-201ENST00000273317 ZDHHC13Q8IUH4 622 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 FNDC5Q8NAU1 212 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 NKX2-3Q8TAU0 364 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 ACTL9Q8TC94 416 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 MLPHQ9BV36 600 aaPredicted RBP8.13□□□□□ -1.11
LIMD1-201ENST00000273317 MID1IP1Q9NPA3 183 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 NCANO14594 1321 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 S100A9P06702 114 aaKnown RBP8.13□□□□□ -1.11
LIMD1-201ENST00000273317 NTSP30990 170 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 PSMD4P55036 377 aaKnown RBP8.13□□□□□ -1.11
LIMD1-201ENST00000273317 PPP4CP60510 307 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 MKRN4PQ13434 485 aaPredicted RBP8.13□□□□□ -1.11
LIMD1-201ENST00000273317 CSHL1Q14406 222 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 NFIXQ14938 502 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 PAGE2BQ5JRK9 111 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 RNF180Q86T96 592 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 WDR12Q9GZL7 423 aaKnown RBP8.13□□□□□ -1.11
LIMD1-201ENST00000273317 CYP4F12Q9HCS2 524 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 CISHQ9NSE2 258 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 TAS2R13Q9NYV9 303 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 STOML2Q9UJZ1 356 aa8.13□□□□□ -1.11
LIMD1-201ENST00000273317 FMN2Q9NZ56 1722 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 C1orf232A0A0U1RR37 186 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 RHOAP61586 193 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 AMPD2Q01433 879 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 GCNT1Q02742 428 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 PTGES3Q15185 160 aaKnown RBP8.12□□□□□ -1.11
LIMD1-201ENST00000273317 RFX4Q33E94 735 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 TCHHL1Q5QJ38 904 aaPredicted RBP8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF571Q7Z3V5 609 aaPredicted RBP8.12□□□□□ -1.11
LIMD1-201ENST00000273317 SLC47A2Q86VL8 602 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 CARNMT1Q8N4J0 409 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 GMCL1Q96IK5 515 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 GMEB1Q9Y692 573 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ACAT1P24752 427 aaKnown RBP8.12□□□□□ -1.11
LIMD1-201ENST00000273317 GPR15P49685 360 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 NR1H2P55055 460 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 BNC1Q01954 994 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 GLRA4Q5JXX5 417 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF470Q6ECI4 717 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ABRAXAS1Q6UWZ7 409 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 OR52L1Q8NGH7 329 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 HTR3CQ8WXA8 447 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 MYLPFQ96A32 169 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 CCNB1IP1Q9NPC3 277 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 GSTK1Q9Y2Q3 226 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 COMMD3-BMI1R4GMX3 469 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 PTPRMP28827 1452 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 WFS1O76024 890 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 CSF1RP07333 972 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 GLI1P08151 1106 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 TAF1CQ15572 869 aaPredicted RBP8.12□□□□□ -1.11
LIMD1-201ENST00000273317 TCEAL5Q5H9L2 206 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 NT5DC3Q86UY8 548 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 FBXL16Q8N461 479 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 AMER2Q8N7J2 671 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 MAGEC3Q8TD91 643 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ZNF75CPQ92670 426 aaPredicted RBP8.12□□□□□ -1.11
LIMD1-201ENST00000273317 C1QTNF7Q9BXJ2 289 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 MUC13Q9H3R2 512 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 EHD3Q9NZN3 535 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 DPP7Q9UHL4 492 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 UBE2QL1A1L167 161 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 ATP6V1C1P21283 382 aa8.12□□□□□ -1.11
LIMD1-201ENST00000273317 HALP42357 657 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms