RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 SEMA6AQ9H2E6 1030 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 GNG13Q9P2W3 67 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 CDH7Q9ULB5 785 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 AXIN2Q9Y2T1 843 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 ITIH2P19823 946 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 CAPGP40121 348 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 ARFIP1P53367 373 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 SLC20A1Q8WUM9 679 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 METTL5Q9NRN9 209 aaKnown RBP16.06■□□□□ 0.16
UBR3-201ENST00000272793 NAGPAQ9UK23 515 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 NCKAP1Q9Y2A7 1128 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 GADD45AP24522 165 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 AFF1P51825 1210 aaKnown RBP16.06■□□□□ 0.16
UBR3-201ENST00000272793 SLC10A7Q0GE19 358 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 CA9Q16790 459 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 GABBR1Q9UBS5 961 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 GPN3Q9UHW5 284 aaPredicted RBP16.06■□□□□ 0.16
UBR3-201ENST00000272793 ERGIC3Q9Y282 383 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 AP1G2O75843 785 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 HOXC12P31275 282 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 TXNRD1Q16881 649 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 IQSEC1Q6DN90 963 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 WDR59Q6PJI9 974 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 LRRC34Q8IZ02 419 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 GDPD5Q8WTR4 605 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 IFNA16P05015 189 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 RIPK1Q13546 671 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 TDRD10Q5VZ19 366 aaKnown RBP16.06■□□□□ 0.16
UBR3-201ENST00000272793 CARNMT1Q8N4J0 409 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 ASB12Q8WXK4 309 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 ANKRD27Q96NW4 1050 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 MTG1Q9BT17 334 aaPredicted RBP16.06■□□□□ 0.16
UBR3-201ENST00000272793 CHIAQ9BZP6 476 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 TMEM260Q9NX78 707 aa16.06■□□□□ 0.16
UBR3-201ENST00000272793 AXLP30530 894 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 ITGA8P53708 1063 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 MC1RQ01726 317 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 SPIDRQ14159 915 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 CRY2Q49AN0 593 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 BICRALQ6AI39 1079 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 CHERPQ8IWX8 916 aaKnown RBP16.05■□□□□ 0.16
UBR3-201ENST00000272793 OR6J1Q8NGC5 347 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 ITFG1Q8TB96 612 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 RPS6KL1Q9Y6S9 549 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 AKT2P31751 481 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 SLC26A3P40879 764 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 CREB5Q02930 508 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 DNAJC14Q6Y2X3 702 aaPredicted RBP16.05■□□□□ 0.16
UBR3-201ENST00000272793 SLITRK1Q96PX8 696 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 ZNF214Q9UL59 606 aaPredicted RBP16.05■□□□□ 0.16
UBR3-201ENST00000272793 DHFRP00374 187 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 TCEAL6Q6IPX3 200 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 STOX1Q6ZVD7 989 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 C2orf69Q8N8R5 385 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 CYTH4Q9UIA0 394 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 TFR2Q9UP52 801 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 IFNAR1P17181 557 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 BMP7P18075 431 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 PIK3R6Q5UE93 754 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 FAM131AQ6UXB0 335 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 ACSF2Q96CM8 615 aaPredicted RBP16.05■□□□□ 0.16
UBR3-201ENST00000272793 ADGRE3Q9BY15 652 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 MROH8Q9H579 483 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 IKZF3Q9UKT9 509 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 SAMD4AQ9UPU9 718 aaKnown RBP16.05■□□□□ 0.16
UBR3-201ENST00000272793 PDE4DIPQ5VU43 2346 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 GSAPA4D1B5 854 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 LDLRP01130 860 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 AGBL2Q5U5Z8 902 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 FOXR1Q6PIV2 292 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 CCNI2Q6ZMN8 369 aaPredicted RBP16.05■□□□□ 0.16
UBR3-201ENST00000272793 Q96MT0 163 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 PNMA5Q96PV4 448 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 PHF12Q96QT6 1004 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 CCDC167Q9P0B6 97 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 AP4E1Q9UPM8 1137 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 DAGLAQ9Y4D2 1042 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 FOXN1O15353 648 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 FKBP6O75344 327 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 LHCGRP22888 699 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 USP46P62068 366 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 INO80DQ53TQ3 878 aaPredicted RBP16.05■□□□□ 0.16
UBR3-201ENST00000272793 CENPSQ8N2Z9 138 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 HTRA1Q92743 480 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 C9orf16Q9BUW7 83 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 ABCG2Q9UNQ0 655 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 RGS6P49758 472 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 MED22Q15528 200 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 ZNF772Q68DY9 489 aaPredicted RBP16.05■□□□□ 0.16
UBR3-201ENST00000272793 NAPEPLDQ6IQ20 393 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 CPT1CQ8TCG5 803 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 OXER1Q8TDS5 423 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 GIPC3Q8TF64 312 aa16.05■□□□□ 0.16
UBR3-201ENST00000272793 HOXB7P09629 217 aa16.04■□□□□ 0.16
UBR3-201ENST00000272793 TOR1AIP1Q5JTV8 583 aa16.04■□□□□ 0.16
UBR3-201ENST00000272793 C12orf56Q8IXR9 622 aa16.04■□□□□ 0.16
UBR3-201ENST00000272793 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.04■□□□□ 0.16
UBR3-201ENST00000272793 SIN3BO75182 1162 aa16.04■□□□□ 0.16
UBR3-201ENST00000272793 FAAH2Q6GMR7 532 aa16.04■□□□□ 0.16
UBR3-201ENST00000272793 PRMT9Q6P2P2 845 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms