RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 PDK2Q15119 407 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 RAB6CQ53S08 254 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 KAZNQ674X7 775 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 BNIPLQ7Z465 357 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 DEFB106AQ8N104 65 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 OSCP1Q8WVF1 389 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 IRGQQ8WZA9 623 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 FRMD8P1Q9BZ68 369 aaPredicted RBP25.41■■□□□ 1.66
SSBP4-201ENST00000270061 ULBP1Q9BZM6 244 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 RAB6CQ9H0N0 254 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 VIPAS39Q9H9C1 493 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 POPDC2Q9HBU9 364 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 DUS2Q9NX74 493 aaKnown RBP25.41■■□□□ 1.66
SSBP4-201ENST00000270061 ATG2BQ96BY7 2078 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 DAPK3O43293 454 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 GBP1P32455 592 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 KCNJ1P48048 391 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 TXNDC11Q6PKC3 985 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 FAM71BQ8TC56 605 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 HSPH1Q92598 858 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 FANCMQ8IYD8 2048 aa25.4■■□□□ 1.66
SSBP4-201ENST00000270061 WDR87Q6ZQQ6 2873 aa25.4■■□□□ 1.66
SSBP4-201ENST00000270061 ZNF487B1APH4 448 aa25.4■■□□□ 1.66
SSBP4-201ENST00000270061 IFNAR2P48551 515 aa25.4■■□□□ 1.66
SSBP4-201ENST00000270061 SNX30Q5VWJ9 437 aa25.4■■□□□ 1.66
SSBP4-201ENST00000270061 PM20D1Q6GTS8 502 aa25.4■■□□□ 1.66
SSBP4-201ENST00000270061 BBS12Q6ZW61 710 aa25.4■■□□□ 1.66
SSBP4-201ENST00000270061 GPRIN1Q7Z2K8 1008 aa25.4■■□□□ 1.66
SSBP4-201ENST00000270061 MAP7D3Q8IWC1 876 aa25.4■■□□□ 1.66
SSBP4-201ENST00000270061 ATG4AQ8WYN0 398 aa25.4■■□□□ 1.66
SSBP4-201ENST00000270061 NDRG1Q92597 394 aaKnown RBP25.4■■□□□ 1.66
SSBP4-201ENST00000270061 FAM149B1Q96BN6 582 aa25.4■■□□□ 1.66
SSBP4-201ENST00000270061 LMAN1LQ9HAT1 526 aa25.4■■□□□ 1.66
SSBP4-201ENST00000270061 GMIPQ9P107 970 aa25.4■■□□□ 1.66
SSBP4-201ENST00000270061 CPQQ9Y646 472 aa25.4■■□□□ 1.66
SSBP4-201ENST00000270061 ZBED1O96006 694 aa25.39■■□□□ 1.66
SSBP4-201ENST00000270061 ARSAP15289 507 aa25.39■■□□□ 1.66
SSBP4-201ENST00000270061 TFE3P19532 575 aaPredicted RBP25.39■■□□□ 1.66
SSBP4-201ENST00000270061 HOXD11P31277 338 aaPredicted RBP25.39■■□□□ 1.66
SSBP4-201ENST00000270061 ZXDBP98169 803 aa25.39■■□□□ 1.66
SSBP4-201ENST00000270061 HECTD3Q5T447 861 aa25.39■■□□□ 1.66
SSBP4-201ENST00000270061 SCYL2Q6P3W7 929 aa25.39■■□□□ 1.66
SSBP4-201ENST00000270061 DDX42Q86XP3 938 aaKnown RBP eCLIP25.39■■□□□ 1.66
SSBP4-201ENST00000270061 TTC13Q8NBP0 860 aa25.39■■□□□ 1.66
SSBP4-201ENST00000270061 NPY6RQ99463 290 aa25.39■■□□□ 1.66
SSBP4-201ENST00000270061 ADAM33Q9BZ11 813 aa25.39■■□□□ 1.66
SSBP4-201ENST00000270061 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.39■■□□□ 1.66
SSBP4-201ENST00000270061 STAP1Q9ULZ2 295 aa25.39■■□□□ 1.66
SSBP4-201ENST00000270061 DRG1Q9Y295 367 aaKnown RBP25.39■■□□□ 1.66
SSBP4-201ENST00000270061 WNT6Q9Y6F9 365 aa25.39■■□□□ 1.66
SSBP4-201ENST00000270061 USP3Q9Y6I4 520 aa25.39■■□□□ 1.66
SSBP4-201ENST00000270061 MYOFQ9NZM1 2061 aa25.39■■□□□ 1.66
SSBP4-201ENST00000270061 OTOL1A6NHN0 477 aaPredicted RBP25.39■■□□□ 1.65
SSBP4-201ENST00000270061 LEFTY2O00292 366 aa25.39■■□□□ 1.65
SSBP4-201ENST00000270061 LAMTOR5O43504 91 aa25.39■■□□□ 1.65
SSBP4-201ENST00000270061 LIASO43766 372 aa25.39■■□□□ 1.65
SSBP4-201ENST00000270061 CD48P09326 243 aa25.39■■□□□ 1.65
SSBP4-201ENST00000270061 ZDHHC11BP0C7U3 371 aa25.39■■□□□ 1.65
SSBP4-201ENST00000270061 MBL2P11226 248 aaPredicted RBP25.39■■□□□ 1.65
SSBP4-201ENST00000270061 TUBP50607 506 aa25.39■■□□□ 1.65
SSBP4-201ENST00000270061 LMNB2Q03252 620 aa25.39■■□□□ 1.65
SSBP4-201ENST00000270061 SNX1Q13596 522 aa25.39■■□□□ 1.65
SSBP4-201ENST00000270061 ERMARDQ5T6L9 678 aa25.39■■□□□ 1.65
SSBP4-201ENST00000270061 ALYREFQ86V81 257 aaKnown RBP25.39■■□□□ 1.65
SSBP4-201ENST00000270061 ATP2A3Q93084 1043 aa25.39■■□□□ 1.65
SSBP4-201ENST00000270061 TLR8Q9NR97 1041 aaKnown RBP25.39■■□□□ 1.65
SSBP4-201ENST00000270061 SMPD4Q9NXE4 827 aa25.39■■□□□ 1.65
SSBP4-201ENST00000270061 RIF1Q5UIP0 2472 aaKnown RBP25.38■■□□□ 1.65
SSBP4-201ENST00000270061 CHRNB1P11230 501 aa25.38■■□□□ 1.65
SSBP4-201ENST00000270061 TNNT3P45378 269 aaPredicted RBP25.38■■□□□ 1.65
SSBP4-201ENST00000270061 CDH6P55285 790 aa25.38■■□□□ 1.65
SSBP4-201ENST00000270061 LRRC32Q14392 662 aa25.38■■□□□ 1.65
SSBP4-201ENST00000270061 HLTFQ14527 1009 aaKnown RBP eCLIP25.38■■□□□ 1.65
SSBP4-201ENST00000270061 PON2Q15165 354 aa25.38■■□□□ 1.65
SSBP4-201ENST00000270061 DCAF6Q58WW2 860 aa25.38■■□□□ 1.65
SSBP4-201ENST00000270061 SND1Q7KZF4 910 aaKnown RBP eCLIP25.38■■□□□ 1.65
SSBP4-201ENST00000270061 CPA6Q8N4T0 437 aa25.38■■□□□ 1.65
SSBP4-201ENST00000270061 FAM129AQ9BZQ8 928 aa25.38■■□□□ 1.65
SSBP4-201ENST00000270061 CHRDQ9H2X0 955 aa25.38■■□□□ 1.65
SSBP4-201ENST00000270061 RRN3Q9NYV6 651 aa25.38■■□□□ 1.65
SSBP4-201ENST00000270061 COCHO43405 550 aa25.37■■□□□ 1.65
SSBP4-201ENST00000270061 GAS8O95995 478 aa25.37■■□□□ 1.65
SSBP4-201ENST00000270061 FYNP06241 537 aa25.37■■□□□ 1.65
SSBP4-201ENST00000270061 NBL1P41271 181 aa25.37■■□□□ 1.65
SSBP4-201ENST00000270061 DPYSL3Q14195 570 aa25.37■■□□□ 1.65
SSBP4-201ENST00000270061 BHLHA9Q7RTU4 235 aa25.37■■□□□ 1.65
SSBP4-201ENST00000270061 PSTKQ8IV42 348 aaKnown RBP25.37■■□□□ 1.65
SSBP4-201ENST00000270061 MREGQ8N565 214 aa25.37■■□□□ 1.65
SSBP4-201ENST00000270061 NKD2Q969F2 451 aaPredicted RBP25.37■■□□□ 1.65
SSBP4-201ENST00000270061 IER2Q9BTL4 223 aa25.37■■□□□ 1.65
SSBP4-201ENST00000270061 SNRNP25Q9BV90 132 aaKnown RBP25.37■■□□□ 1.65
SSBP4-201ENST00000270061 DPH5Q9H2P9 285 aa25.37■■□□□ 1.65
SSBP4-201ENST00000270061 CCSER2Q9H7U1 834 aa25.37■■□□□ 1.65
SSBP4-201ENST00000270061 ECT2Q9H8V3 914 aa25.37■■□□□ 1.65
SSBP4-201ENST00000270061 OGFRQ9NZT2 677 aa25.37■■□□□ 1.65
SSBP4-201ENST00000270061 SCML2Q9UQR0 700 aa25.37■■□□□ 1.65
SSBP4-201ENST00000270061 NEU2Q9Y3R4 380 aa25.37■■□□□ 1.65
SSBP4-201ENST00000270061 YJEFN3A6XGL0 299 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 E7ENQ6 273 aa25.36■■□□□ 1.65
SSBP4-201ENST00000270061 CST8O60676 142 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms