RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 APPL1Q9UKG1 709 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 CFLARO15519 480 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 LTFP02788 710 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 PKNOX1P55347 436 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 LRRC23Q53EV4 343 aaPredicted RBP28.15■■■□□ 2.1
CBX4-201ENST00000269397 FSCBQ5H9T9 825 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 PAOXQ6QHF9 649 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 SNX32Q86XE0 403 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 DRAXINQ8NBI3 349 aaPredicted RBP28.15■■■□□ 2.1
CBX4-201ENST00000269397 P2RY11Q96G91 374 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 HES2Q9Y543 173 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 CHRNGP07510 517 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 DESP17661 470 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 TTLL12Q14166 644 aaPredicted RBP28.15■■■□□ 2.1
CBX4-201ENST00000269397 PKDCCQ504Y2 493 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 RBM44Q6ZP01 1051 aaKnown RBP28.15■■■□□ 2.1
CBX4-201ENST00000269397 TDRD5Q8NAT2 981 aaKnown RBP28.15■■■□□ 2.1
CBX4-201ENST00000269397 NDRG1Q92597 394 aaKnown RBP28.15■■■□□ 2.1
CBX4-201ENST00000269397 CERS2Q96G23 380 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 CNBD2Q96M20 576 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 FAM96AQ9H5X1 160 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 ZNF112Q9UJU3 913 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 GJA3Q9Y6H8 435 aa28.15■■■□□ 2.1
CBX4-201ENST00000269397 PALM2-AKAP2B1ALY0 433 aaPredicted RBP28.14■■■□□ 2.1
CBX4-201ENST00000269397 DNAJA2O60884 412 aa28.14■■■□□ 2.1
CBX4-201ENST00000269397 ZFXP17010 805 aaPredicted RBP28.14■■■□□ 2.1
CBX4-201ENST00000269397 GP5P40197 560 aa28.14■■■□□ 2.1
CBX4-201ENST00000269397 ZNF280AP59817 542 aaPredicted RBP28.14■■■□□ 2.1
CBX4-201ENST00000269397 RBP5P82980 135 aa28.14■■■□□ 2.1
CBX4-201ENST00000269397 CNGA3Q16281 694 aa28.14■■■□□ 2.1
CBX4-201ENST00000269397 USP13Q92995 863 aaPredicted RBP28.14■■■□□ 2.1
CBX4-201ENST00000269397 CDRT15Q96T59 188 aa28.14■■■□□ 2.1
CBX4-201ENST00000269397 RTKNQ9BST9 563 aa28.14■■■□□ 2.1
CBX4-201ENST00000269397 DPEP3Q9H4B8 488 aa28.14■■■□□ 2.1
CBX4-201ENST00000269397 CDY2AQ9Y6F7 541 aa28.14■■■□□ 2.1
CBX4-201ENST00000269397 CDY1Q9Y6F8 540 aa28.14■■■□□ 2.1
CBX4-201ENST00000269397 FBXO21O94952 628 aa28.14■■■□□ 2.09
CBX4-201ENST00000269397 ARF4P18085 180 aaPredicted RBP28.14■■■□□ 2.09
CBX4-201ENST00000269397 EDNRBP24530 442 aa28.14■■■□□ 2.09
CBX4-201ENST00000269397 EPHA3P29320 983 aa28.14■■■□□ 2.09
CBX4-201ENST00000269397 THOP1P52888 689 aa28.14■■■□□ 2.09
CBX4-201ENST00000269397 STRA8Q7Z7C7 330 aa28.14■■■□□ 2.09
CBX4-201ENST00000269397 CNKSR2Q8WXI2 1034 aa28.14■■■□□ 2.09
CBX4-201ENST00000269397 KIF12Q96FN5 646 aa28.14■■■□□ 2.09
CBX4-201ENST00000269397 HIC2Q96JB3 615 aa28.14■■■□□ 2.09
CBX4-201ENST00000269397 TCF7L2Q9NQB0 619 aa28.14■■■□□ 2.09
CBX4-201ENST00000269397 PSMD13Q9UNM6 376 aa28.14■■■□□ 2.09
CBX4-201ENST00000269397 SCN1AP35498 2009 aa28.13■■■□□ 2.09
CBX4-201ENST00000269397 MPSTP25325 297 aa28.13■■■□□ 2.09
CBX4-201ENST00000269397 ADORA2BP29275 332 aa28.13■■■□□ 2.09
CBX4-201ENST00000269397 R3HDM1Q15032 1099 aaKnown RBP28.13■■■□□ 2.09
CBX4-201ENST00000269397 ACVR1CQ8NER5 493 aa28.13■■■□□ 2.09
CBX4-201ENST00000269397 OR52K1Q8NGK4 314 aa28.13■■■□□ 2.09
CBX4-201ENST00000269397 ASB7Q9H672 318 aa28.13■■■□□ 2.09
CBX4-201ENST00000269397 COPS7BQ9H9Q2 264 aaPredicted RBP28.13■■■□□ 2.09
CBX4-201ENST00000269397 AK5Q9Y6K8 562 aa28.13■■■□□ 2.09
CBX4-201ENST00000269397 TFAP2AP05549 437 aa28.13■■■□□ 2.09
CBX4-201ENST00000269397 MLNP12872 115 aa28.13■■■□□ 2.09
CBX4-201ENST00000269397 XRCC1P18887 633 aaPredicted RBP28.13■■■□□ 2.09
CBX4-201ENST00000269397 GMPSP49915 693 aaPredicted RBP28.13■■■□□ 2.09
CBX4-201ENST00000269397 INSCQ1MX18 579 aa28.13■■■□□ 2.09
CBX4-201ENST00000269397 FSTL4Q6MZW2 842 aa28.13■■■□□ 2.09
CBX4-201ENST00000269397 BTBD9Q96Q07 612 aa28.13■■■□□ 2.09
CBX4-201ENST00000269397 PRMT7Q9NVM4 692 aaPredicted RBP28.13■■■□□ 2.09
CBX4-201ENST00000269397 IRAK4Q9NWZ3 460 aa28.13■■■□□ 2.09
CBX4-201ENST00000269397 LZTS1Q9Y250 596 aa28.13■■■□□ 2.09
CBX4-201ENST00000269397 G3V2L1 256 aa28.12■■■□□ 2.09
CBX4-201ENST00000269397 VTNP04004 478 aa28.12■■■□□ 2.09
CBX4-201ENST00000269397 POLBP06746 335 aa28.12■■■□□ 2.09
CBX4-201ENST00000269397 IYDQ6PHW0 289 aa28.12■■■□□ 2.09
CBX4-201ENST00000269397 METTL25Q8N6Q8 603 aa28.12■■■□□ 2.09
CBX4-201ENST00000269397 ZNF669Q96BR6 464 aaPredicted RBP28.12■■■□□ 2.09
CBX4-201ENST00000269397 MARK4Q96L34 752 aa28.12■■■□□ 2.09
CBX4-201ENST00000269397 GRIP2Q9C0E4 1043 aa28.12■■■□□ 2.09
CBX4-201ENST00000269397 KIAA1257Q9ULG3 409 aa28.12■■■□□ 2.09
CBX4-201ENST00000269397 KCNK1O00180 336 aa28.12■■■□□ 2.09
CBX4-201ENST00000269397 PEX1O43933 1283 aa28.12■■■□□ 2.09
CBX4-201ENST00000269397 CLPTM1O96005 669 aa28.12■■■□□ 2.09
CBX4-201ENST00000269397 TGFB3P10600 412 aa28.12■■■□□ 2.09
CBX4-201ENST00000269397 PIK3R1P27986 724 aa28.12■■■□□ 2.09
CBX4-201ENST00000269397 PRICKLE1Q96MT3 831 aaPredicted RBP28.12■■■□□ 2.09
CBX4-201ENST00000269397 A0A096LPK6 155 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 SMIM31A0A1B0GVY4 71 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 STX16-NPEPL1H3BU86 382 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 VILLO15195 856 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 CRTAMO95727 393 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 MCF2P10911 925 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 CCDC130P13994 396 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 INHBCP55103 352 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 FLOT2Q14254 428 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 GALNT4Q8N4A0 578 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 STK39Q9UEW8 545 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 GOLGA8TH3BQL2 631 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 GARSP41250 739 aaKnown RBP28.11■■■□□ 2.09
CBX4-201ENST00000269397 CELF3Q5SZQ8 465 aaKnown RBP28.11■■■□□ 2.09
CBX4-201ENST00000269397 TMEM198Q66K66 360 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 DSELQ8IZU8 1212 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 OR6B3Q8NGW1 331 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 FAM81AQ8TBF8 368 aa28.11■■■□□ 2.09
CBX4-201ENST00000269397 LRGUKQ96M69 825 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms