RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 GRIA3P42263 894 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 CDH18Q13634 790 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 DDX39BQ13838 428 aaKnown RBP10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 QPCTQ16769 361 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 BOLA3Q53S33 107 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 ARSJQ5FYB0 599 aaPredicted RBP10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 MACC1Q6ZN28 852 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 ZSWIM2Q8NEG5 633 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 MYDGFQ969H8 173 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 C12orf4Q9NQ89 552 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 SYNPO2Q9UMS6 1093 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 COQ6Q9Y2Z9 468 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 TFECO14948 347 aaPredicted RBP10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 KCNQ2O43526 872 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 MBL2P11226 248 aaPredicted RBP10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 CTSEP14091 401 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 HPGDP15428 266 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 DPEP1P16444 411 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 ACADSBP45954 432 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 MGAT5Q09328 741 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 SGCGQ13326 291 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 MPP3Q13368 585 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 SCARA3Q6AZY7 606 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 MRNIPQ6NTE8 343 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 EIF1ADQ8N9N8 165 aaKnown RBP10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 ZNF671Q8TAW3 534 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 ZNF398Q8TD17 642 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 TLR10Q9BXR5 811 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 SP140LQ9H930 580 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 MED14O60244 1454 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 SLC2A4P14672 509 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 LBPP18428 481 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 ETFBP38117 255 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 GSTM5P46439 218 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 RBP5P82980 135 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 SCRN3Q0VDG4 424 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 FAAP100Q0VG06 881 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 CARTPTQ16568 116 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 INO80DQ53TQ3 878 aaPredicted RBP10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 ERICH5Q6P6B1 374 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 PARP8Q8N3A8 854 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 GRPEL2Q8TAA5 225 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 TEKT5Q96M29 485 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 UNKQ9C0B0 810 aaKnown RBP10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 GPAMQ9HCL2 828 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 HPSEQ9Y251 543 aa10.96□□□□□ -0.65
SLC6A4-201ENST00000261707 LOC110117498-PIK3R3F6TDL0 507 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 FESP07332 822 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 IST1P53990 364 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 PSMD4P55036 377 aaKnown RBP10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 TUBA3CQ13748 450 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 PAGE2Q7Z2X7 111 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 ADARB2Q9NS39 739 aaKnown RBP10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 EME2A4GXA9 379 aaPredicted RBP10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 H3BN98 237 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 PSMD12O00232 456 aaPredicted RBP10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 MAP3K6O95382 1288 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 NELFEP18615 380 aaKnown RBP10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 SSTR1P30872 391 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 UBAP2LQ14157 1087 aaKnown RBP10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 PDK2Q15119 407 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 LPCAT4Q643R3 524 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 KLHL24Q6TFL4 600 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 PROSER1Q86XN7 944 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 MREGQ8N565 214 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 DPY30Q9C005 99 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 SLITRK2Q9H156 845 aa10.96□□□□□ -0.66
SLC6A4-201ENST00000261707 DDX3XO00571 662 aaKnown RBP eCLIP10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 PMPCBO75439 489 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 FXR2P51116 673 aaKnown RBP eCLIP10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 PKN1Q16512 942 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 DCAF6Q58WW2 860 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 PPP1R15BQ5SWA1 713 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 GALNT18Q6P9A2 607 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 TMEM138Q9NPI0 162 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 SAE1Q9UBE0 346 aaPredicted RBP10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 RAPGEFL1Q9UHV5 662 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 MAPRE3Q9UPY8 281 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 AAR2Q9Y312 384 aaKnown RBP10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 SNX9Q9Y5X1 595 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 POLR1AO95602 1720 aaPredicted RBP10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 FAM92AA1XBS5 289 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 POLRMTO00411 1230 aaKnown RBP10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 TPBGLP0DKB5 382 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 FRG1Q14331 258 aaKnown RBP10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 TTI2Q6NXR4 508 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 DEFB132Q7Z7B7 95 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 MYLPFQ96A32 169 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 NACC2Q96BF6 587 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 SLC38A7Q9NVC3 462 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 ADPRHL2Q9NX46 363 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 CPA4Q9UI42 421 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 ANKRD6Q9Y2G4 727 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 CDK12Q9NYV4 1490 aaPredicted RBP10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 TRIM38O00635 465 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 EXTL3O43909 919 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 ZC3H11AO75152 810 aaKnown RBP eCLIP10.95□□□□□ -0.664e-7■■■■□ 24.6
SLC6A4-201ENST00000261707 IGKV5-2P06315 115 aa10.95□□□□□ -0.66
SLC6A4-201ENST00000261707 LYNP07948 512 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms