RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TMEM114B3SHH9 223 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 KRT6AP02538 564 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 KRT6BP04259 564 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 RBL1P28749 1068 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 KRT6CP48668 564 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 ACVR2BQ13705 512 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 ZNF268Q14587 947 aaPredicted RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 GSTA3Q16772 222 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 FAM98BQ52LJ0 330 aaKnown RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 SERPINB11Q96P15 392 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 GANQ9H2C0 597 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 THG1LQ9NWX6 298 aaKnown RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 NDUFAF1Q9Y375 327 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 RICTORQ6R327 1708 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 TRDMT1O14717 391 aaKnown RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 TPP1O14773 563 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 BUD23O43709 281 aaKnown RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 KPNA6O60684 536 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 AMHP03971 560 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 ATP6V1C1P21283 382 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 TGFB2P61812 414 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 FSCN1Q16658 493 aaKnown RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 C15orf59Q2T9L4 293 aaPredicted RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 PRAMEF19Q5SWL8 479 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 COPS5Q92905 334 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 SH3GL1Q99961 368 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 MYLK2Q9H1R3 596 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 CROTQ9UKG9 612 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 ADGRA3Q8IWK6 1321 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 PHGDHO43175 533 aaKnown RBP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 SERPINE1P05121 402 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 NPY2RP49146 381 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 BCL2L1Q07817 233 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 DDR2Q16832 855 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 KCNT2Q6UVM3 1135 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 MARK2Q7KZI7 788 aaKnown RBP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 DHFR2Q86XF0 187 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 IFNLR1Q8IU57 520 aaPredicted RBP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 CAVIN3Q969G5 261 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 BBS4Q96RK4 519 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 L2HGDHQ9H9P8 463 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 NMRAL1Q9HBL8 299 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 TRPV2Q9Y5S1 764 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 CASZ1Q86V15 1759 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 TRIM43BA6NCK2 446 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 TK2O00142 265 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 ZNF7P17097 686 aaPredicted RBP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 PPP2R1BP30154 601 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 GP5P40197 560 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 KCTD19Q17RG1 926 aaPredicted RBP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 IL27RAQ6UWB1 636 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 AHCYL2Q96HN2 611 aaKnown RBP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 ULBP1Q9BZM6 244 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 BPIFA1Q9NP55 256 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 CHST7Q9NS84 486 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 CCDC167Q9P0B6 97 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 PRKAG3Q9UGI9 489 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 PPP2R3BQ9Y5P8 575 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 F8VP50 259 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 KPNA3O00505 521 aaPredicted RBP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 CAPN1P07384 714 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 MAPTP10636 758 aaKnown RBP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 ARMCX4Q5H9R4 360 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 RETSATQ6NUM9 610 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 RNF145Q96MT1 663 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 HGH1Q9BTY7 390 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 KIAA1683Q9H0B3 1180 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 UBA2Q9UBT2 640 aaPredicted RBP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 PCDHA3Q9Y5H8 950 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 MROH7Q68CQ1 1323 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 KANSL1LA0AUZ9 987 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 DDX3XO00571 662 aaKnown RBP eCLIP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 FCHO1O14526 889 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 ZNF862O60290 1169 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 BANF1O75531 89 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 ENO2P09104 434 aaPredicted RBP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 CRABP2P29373 138 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 HDDC2Q7Z4H3 204 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 FAM9CQ8IZT9 166 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 SAMD3Q8N6K7 520 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 C19orf18Q8NEA5 215 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 OR56A4Q8NGH8 313 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 WDR36Q8NI36 951 aaKnown RBP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 C6orf62Q9GZU0 229 aaPredicted RBP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 TAS2R14Q9NYV8 317 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 FAM50BQ9Y247 325 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 SLC9A8Q9Y2E8 581 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 WNT10BO00744 389 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 UMPSP11172 480 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 MMP13P45452 471 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 ATP12AP54707 1039 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 NUP107P57740 925 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 NEDD8Q15843 81 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 ZCCHC8Q6NZY4 707 aaKnown RBP12.32□□□□□ -0.44
COL8A1-201ENST00000261037 TMC3Q7Z5M5 1100 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 CDK20Q8IZL9 346 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 SIX5Q8N196 739 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 CAMKK1Q8N5S9 505 aa12.32□□□□□ -0.44
COL8A1-201ENST00000261037 METTL6Q8TCB7 284 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms