RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 NHSL1Q5SYE7 1610 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 TK2O00142 265 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 E2F6O75461 281 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 VAPBO95292 243 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 CRHR1P34998 444 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 ETV4P43268 484 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 RAB6CQ53S08 254 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 TEDDM1Q5T9Z0 273 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 NCCRP1Q6ZVX7 275 aaPredicted RBP12.59□□□□□ -0.39
USP30-201ENST00000257548 ARCQ7LC44 396 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 IFNLR1Q8IU57 520 aaPredicted RBP12.59□□□□□ -0.39
USP30-201ENST00000257548 HERC6Q8IVU3 1022 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 ACTRT2Q8TDY3 377 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 PRICKLE1Q96MT3 831 aaPredicted RBP12.59□□□□□ -0.39
USP30-201ENST00000257548 RAB6CQ9H0N0 254 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 QTRT2Q9H974 415 aaKnown RBP12.59□□□□□ -0.39
USP30-201ENST00000257548 CXorf21Q9HAI6 301 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 COL20A1Q9P218 1284 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 STK39Q9UEW8 545 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 FAM198AQ9UFP1 575 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 CDC14AQ9UNH5 594 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 SORCS3Q9UPU3 1222 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 AFG3L2Q9Y4W6 797 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 NR5A2O00482 541 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 RFPL1O75677 317 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 METTL18O95568 372 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 CCNE2O96020 404 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 MMP10P09238 476 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 HDCP19113 662 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 GABRB2P47870 512 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 GRIA4P48058 902 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 ADGRE1Q14246 886 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 RC3H1Q5TC82 1133 aaKnown RBP12.59□□□□□ -0.39
USP30-201ENST00000257548 ZFP1Q6P2D0 407 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 PACS1Q6VY07 963 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 C12orf29Q8N999 325 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 SYTL5Q8TDW5 730 aaPredicted RBP12.59□□□□□ -0.39
USP30-201ENST00000257548 MFSD14AQ96MC6 490 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 HAPLN3Q96S86 360 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 BRD8Q9H0E9 1235 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 ANKEF1Q9NU02 776 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 FZD1Q9UP38 647 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 PSAT1Q9Y617 370 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 PTPRJQ12913 1337 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 IRS2Q9Y4H2 1338 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 LRP5O75197 1615 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 A0A087WXM4 84 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 HEATR9A2RTY3 570 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 ANGPT2O15123 496 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 ESRRBO95718 433 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 PENKP01210 267 aaPredicted RBP12.59□□□□□ -0.39
USP30-201ENST00000257548 ADORA2AP29274 412 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 WNT7BP56706 349 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 PSME3P61289 254 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 JAG1P78504 1218 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 RGS21Q2M5E4 152 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 LRRC38Q5VT99 294 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 RWDD4Q6NW29 188 aaKnown RBP12.59□□□□□ -0.39
USP30-201ENST00000257548 HHIPL2Q6UWX4 724 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 ACOT1Q86TX2 421 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 GAB3Q8WWW8 586 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 CNPY3Q9BT09 278 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 OSBPL6Q9BZF3 934 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 SNX15Q9NRS6 342 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.59□□□□□ -0.39
USP30-201ENST00000257548 ATP8B3O60423 1300 aa12.59□□□□□ -0.39
USP30-201ENST00000257548 SLC15A5A6NIM6 579 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 M0R3G1 203 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 VILLO15195 856 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 WDR46O15213 610 aaKnown RBP12.58□□□□□ -0.4
USP30-201ENST00000257548 PAPSS1O43252 624 aaPredicted RBP12.58□□□□□ -0.4
USP30-201ENST00000257548 KRT75O95678 551 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 MAPTP10636 758 aaKnown RBP12.58□□□□□ -0.4
USP30-201ENST00000257548 UGT1A6P19224 532 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 AOC1P19801 751 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 UGT1A1P22309 533 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 UGT1A4P22310 534 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 UGT1A3P35503 534 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 UGT1A5P35504 534 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 DAB2P98082 770 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 SLC18A2Q05940 514 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 PTP4A2Q12974 167 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 LSM12Q3MHD2 195 aaKnown RBP12.58□□□□□ -0.4
USP30-201ENST00000257548 GALNT18Q6P9A2 607 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 CCDC60Q8IWA6 550 aaPredicted RBP12.58□□□□□ -0.4
USP30-201ENST00000257548 CBR4Q8N4T8 237 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 OR52K1Q8NGK4 314 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 CAPSLQ8WWF8 208 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 RNF157Q96PX1 679 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 CGRRF1Q99675 332 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 MRPL4Q9BYD3 311 aaKnown RBP12.58□□□□□ -0.4
USP30-201ENST00000257548 ATXN3LQ9H3M9 355 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 CLK4Q9HAZ1 481 aaKnown RBP12.58□□□□□ -0.4
USP30-201ENST00000257548 EBF1Q9UH73 591 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 SNX5Q9Y5X3 404 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 TEX264Q9Y6I9 313 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 IGKV6D-41A0A0C4DH26 115 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 CHADO15335 359 aa12.58□□□□□ -0.4
USP30-201ENST00000257548 SRP72O76094 671 aaKnown RBP12.58□□□□□ -0.4
USP30-201ENST00000257548 SUPT7LO94864 414 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms