RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ANXA11P50995 505 aaKnown RBP19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 GCNT1Q02742 428 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 CYP4Z1Q86W10 505 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 GATAD2AQ86YP4 633 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 SPATA6LQ8N4H0 392 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 GFM2Q969S9 779 aaKnown RBP19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 MAPTP10636 758 aaKnown RBP19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 GUCA1AP43080 201 aaPredicted RBP19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 DPYSL3Q14195 570 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 PWWP2AQ96N64 755 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 OR12D3Q9UGF7 316 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 LIMD1Q9UGP4 676 aa19.04■□□□□ 0.64
SMARCC1-201ENST00000254480 TBC1D3BA6NDS4 549 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 IGSF6O95976 241 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 FGD3Q5JSP0 725 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 SAMD3Q8N6K7 520 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 HELQQ8TDG4 1101 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 RNPEPQ9H4A4 650 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 PACSIN3Q9UKS6 424 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 CCDC154A6NI56 674 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 FCHO1O14526 889 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 NOS3P29474 1203 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 PKNOX1P55347 436 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 ZNF844Q08AG5 666 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 TAF2Q6P1X5 1199 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 DENND1CQ8IV53 801 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 EMID1Q96A84 441 aaPredicted RBP19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 ABCG8Q9H221 673 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 MAP2P11137 1827 aaKnown RBP19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 TPP1O14773 563 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 KRT6AP02538 564 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 KRT6BP04259 564 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 KRT6CP48668 564 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 IL27RAQ6UWB1 636 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 C12orf29Q8N999 325 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 KLHL4Q9C0H6 718 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 FBXO6Q9NRD1 293 aaPredicted RBP19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 B4GALT5O43286 388 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 SPATA31D3P0C874 917 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 ADRA1DP25100 572 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 PSMB9P28065 219 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 SETMARQ53H47 684 aaPredicted RBP19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 CELF3Q5SZQ8 465 aaKnown RBP19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 ZNF621Q6ZSS3 439 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 SPATA31D4Q6ZUB0 917 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 PTF1AQ7RTS3 328 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 IFNLR1Q8IU57 520 aaPredicted RBP19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 NDNQ99608 321 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 HGH1Q9BTY7 390 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 ALG9Q9H6U8 611 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 THG1LQ9NWX6 298 aaKnown RBP19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 FBXL21Q9UKT6 434 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 MAGEA13PA6NCF6 341 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 ABL2P42684 1182 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 ZPBP2Q6X784 338 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 KYQ8NBH2 561 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 PPP1R14AQ96A00 147 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 MYOCQ99972 504 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 PORCNQ9H237 461 aa19.03■□□□□ 0.64
SMARCC1-201ENST00000254480 KRT20P35900 424 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 RNF145Q96MT1 663 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 SMIM10L2AP0DMW4 78 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 SMIM10L2BP0DMW5 78 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 KDELR1P24390 212 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 RPA3P35244 121 aaPredicted RBP19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 C1orf186Q6ZWK4 172 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 OR8H2Q8N162 312 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 CORO1BQ9BR76 489 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 IKZF4Q9H2S9 585 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 POLG2Q9UHN1 485 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 SALL3Q9BXA9 1300 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 NPY2RP49146 381 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 SPANXN3Q5MJ09 141 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 CLIP3Q96DZ5 547 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 CXorf56Q9H5V9 222 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 KLHL20Q9Y2M5 609 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 NDUFAF1Q9Y375 327 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 ABCA9Q8IUA7 1624 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 TSC22D2O75157 780 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 OR56A5P0C7T3 313 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 FLT3P36888 993 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 CCR4P51679 360 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 MAXP61244 160 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 HSPA14Q0VDF9 509 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 FBXL19Q6PCT2 694 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 ZNF410Q86VK4 478 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 CERS5Q8N5B7 392 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 COL26A1Q96A83 441 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 DEPDC7Q96QD5 511 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 CPNE1Q99829 537 aa19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 FHDC1Q9C0D6 1143 aaPredicted RBP19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 KRCC1Q9NPI7 259 aaPredicted RBP19.02■□□□□ 0.64
SMARCC1-201ENST00000254480 MAGEB16A2A368 324 aa19.02■□□□□ 0.63
SMARCC1-201ENST00000254480 TRIM13O60858 407 aa19.02■□□□□ 0.63
SMARCC1-201ENST00000254480 SERPINE1P05121 402 aa19.02■□□□□ 0.63
SMARCC1-201ENST00000254480 POLR2EP19388 210 aaKnown RBP19.02■□□□□ 0.63
SMARCC1-201ENST00000254480 PRKAG1P54619 331 aa19.02■□□□□ 0.63
SMARCC1-201ENST00000254480 MRPS35P82673 323 aaKnown RBP19.02■□□□□ 0.63
SMARCC1-201ENST00000254480 XRCC4Q13426 336 aa19.02■□□□□ 0.63
SMARCC1-201ENST00000254480 DGKKQ5KSL6 1271 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms