RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 DBX2Q6ZNG2 339 aa21.77■■□□□ 1.08
NEDD8-201ENST00000250495 ANP32EQ9BTT0 268 aa21.77■■□□□ 1.08
NEDD8-201ENST00000250495 ASNSD1Q9NWL6 643 aa21.77■■□□□ 1.08
NEDD8-201ENST00000250495 ANKRD6Q9Y2G4 727 aa21.77■■□□□ 1.08
NEDD8-201ENST00000250495 FNDC3AQ9Y2H6 1198 aaKnown RBP21.77■■□□□ 1.08
NEDD8-201ENST00000250495 CABIN1Q9Y6J0 2220 aa21.77■■□□□ 1.08
NEDD8-201ENST00000250495 EDDM13A0A1B0GTR0 161 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 BECN2A8MW95 431 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 ABCB4P21439 1286 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 NNMTP40261 264 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 SNX16P57768 344 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 PTK2Q05397 1052 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 EIF4EBP2Q13542 120 aaPredicted RBP21.76■■□□□ 1.07
NEDD8-201ENST00000250495 TAF5Q15542 800 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 CST6Q15828 149 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 C9orf64Q5T6V5 341 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 KIAA0895LQ68EN5 471 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 WDTC1Q8N5D0 677 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 RHBDD1Q8TEB9 315 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 SHC3Q92529 594 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 RNF34Q969K3 372 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 PPP1R13BQ96KQ4 1090 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 NOX5Q96PH1 765 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 CDC6Q99741 560 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 OMDQ99983 421 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 FAM204AQ9H8W3 233 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 PCDHGC3Q9UN70 934 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 SNX11Q9Y5W9 270 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 SLCO1B1Q9Y6L6 691 aa21.76■■□□□ 1.07
NEDD8-201ENST00000250495 FRYQ5TBA9 3013 aa21.75■■□□□ 1.07
NEDD8-201ENST00000250495 TTC34A8MYJ7 566 aa21.75■■□□□ 1.07
NEDD8-201ENST00000250495 FLRT2O43155 660 aa21.75■■□□□ 1.07
NEDD8-201ENST00000250495 CCR1P32246 355 aa21.75■■□□□ 1.07
NEDD8-201ENST00000250495 SLC8A1P32418 973 aa21.75■■□□□ 1.07
NEDD8-201ENST00000250495 CTSOP43234 321 aaPredicted RBP21.75■■□□□ 1.07
NEDD8-201ENST00000250495 MTIF2P46199 727 aaKnown RBP21.75■■□□□ 1.07
NEDD8-201ENST00000250495 OXCT1P55809 520 aa21.75■■□□□ 1.07
NEDD8-201ENST00000250495 SULT2A1Q06520 285 aa21.75■■□□□ 1.07
NEDD8-201ENST00000250495 MTA1Q13330 715 aa21.75■■□□□ 1.07
NEDD8-201ENST00000250495 TPD52L1Q16890 204 aaPredicted RBP21.75■■□□□ 1.07
NEDD8-201ENST00000250495 TTC39BQ5VTQ0 682 aaPredicted RBP21.75■■□□□ 1.07
NEDD8-201ENST00000250495 MMAAQ8IVH4 418 aaKnown RBP21.75■■□□□ 1.07
NEDD8-201ENST00000250495 APCDD1Q8J025 514 aa21.75■■□□□ 1.07
NEDD8-201ENST00000250495 DEFB106AQ8N104 65 aa21.75■■□□□ 1.07
NEDD8-201ENST00000250495 MLKLQ8NB16 471 aa21.75■■□□□ 1.07
NEDD8-201ENST00000250495 ZCCHC14Q8WYQ9 949 aaKnown RBP21.75■■□□□ 1.07
NEDD8-201ENST00000250495 PPP1R9BQ96SB3 815 aa21.75■■□□□ 1.07
NEDD8-201ENST00000250495 SLCO3A1Q9UIG8 710 aa21.75■■□□□ 1.07
NEDD8-201ENST00000250495 ITIH6Q6UXX5 1313 aa21.75■■□□□ 1.07
NEDD8-201ENST00000250495 FAM47DPA6NHR8 397 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 LRRC72A6NJI9 287 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 MID1O15344 667 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 HSF2BPO75031 334 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 PON1P27169 355 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 GALCP54803 685 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 PITX1P78337 314 aaPredicted RBP21.74■■□□□ 1.07
NEDD8-201ENST00000250495 RABGAP1LQ5R372 815 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 ADAT2Q7Z6V5 191 aaKnown RBP21.74■■□□□ 1.07
NEDD8-201ENST00000250495 IRF2BP1Q8IU81 584 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 PNPLA1Q8N8W4 532 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 IGSF8Q969P0 613 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 SLC2A13Q96QE2 648 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 CPXM1Q96SM3 734 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 PRMT1Q99873 361 aaKnown RBP21.74■■□□□ 1.07
NEDD8-201ENST00000250495 NEUROG2Q9H2A3 272 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 DDIT4Q9NX09 232 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 ADAMTS1Q9UHI8 967 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 FZD4Q9ULV1 537 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 IGF2RP11717 2491 aa21.74■■□□□ 1.07
NEDD8-201ENST00000250495 A0A1W2PP55 124 aa21.73■■□□□ 1.07
NEDD8-201ENST00000250495 DFNA5O60443 496 aa21.73■■□□□ 1.07
NEDD8-201ENST00000250495 RNASEH2AO75792 299 aaKnown RBP21.73■■□□□ 1.07
NEDD8-201ENST00000250495 IGHV4-34P06331 123 aa21.73■■□□□ 1.07
NEDD8-201ENST00000250495 KRT9P35527 623 aa21.73■■□□□ 1.07
NEDD8-201ENST00000250495 PLK1P53350 603 aa21.73■■□□□ 1.07
NEDD8-201ENST00000250495 RACK1P63244 317 aaKnown RBP21.73■■□□□ 1.07
NEDD8-201ENST00000250495 APBA1Q02410 837 aa21.73■■□□□ 1.07
NEDD8-201ENST00000250495 OR6B2Q6IFH4 312 aa21.73■■□□□ 1.07
NEDD8-201ENST00000250495 LRSAM1Q6UWE0 723 aa21.73■■□□□ 1.07
NEDD8-201ENST00000250495 C11orf57Q6ZUT1 292 aaPredicted RBP21.73■■□□□ 1.07
NEDD8-201ENST00000250495 CCAR2Q8N163 923 aaKnown RBP21.73■■□□□ 1.07
NEDD8-201ENST00000250495 PTPRN2Q92932 1015 aa21.73■■□□□ 1.07
NEDD8-201ENST00000250495 SKA1Q96BD8 255 aa21.73■■□□□ 1.07
NEDD8-201ENST00000250495 RPL10LQ96L21 214 aaKnown RBP21.73■■□□□ 1.07
NEDD8-201ENST00000250495 FAM129BQ96TA1 746 aa21.73■■□□□ 1.07
NEDD8-201ENST00000250495 SYNJ2BP-COX16A0A087WUM0 186 aa21.72■■□□□ 1.07
NEDD8-201ENST00000250495 A0A1B0GVM2 712 aa21.72■■□□□ 1.07
NEDD8-201ENST00000250495 A0A1W2PPC4 97 aa21.72■■□□□ 1.07
NEDD8-201ENST00000250495 TCAF2A6NFQ2 919 aa21.72■■□□□ 1.07
NEDD8-201ENST00000250495 SRRM3A6NNA2 597 aaPredicted RBP21.72■■□□□ 1.07
NEDD8-201ENST00000250495 ADH1BP00325 375 aa21.72■■□□□ 1.07
NEDD8-201ENST00000250495 C5AR1P21730 350 aa21.72■■□□□ 1.07
NEDD8-201ENST00000250495 NCEH1Q6PIU2 408 aa21.72■■□□□ 1.07
NEDD8-201ENST00000250495 SND1Q7KZF4 910 aaKnown RBP eCLIP21.72■■□□□ 1.07
NEDD8-201ENST00000250495 SLCO6A1Q86UG4 719 aa21.72■■□□□ 1.07
NEDD8-201ENST00000250495 PASD1Q8IV76 773 aa21.72■■□□□ 1.07
NEDD8-201ENST00000250495 OR2T34Q8NGX1 318 aa21.72■■□□□ 1.07
NEDD8-201ENST00000250495 BAHD1Q8TBE0 780 aaPredicted RBP21.72■■□□□ 1.07
NEDD8-201ENST00000250495 ORAI3Q9BRQ5 295 aa21.72■■□□□ 1.07
NEDD8-201ENST00000250495 ACE2Q9BYF1 805 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms