RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ST8SIA6P61647 398 aa25.09■■□□□ 1.61
SDF2L1-201ENST00000248958 PTPRNQ16849 979 aa25.09■■□□□ 1.61
SDF2L1-201ENST00000248958 PLEKHG6Q3KR16 790 aa25.09■■□□□ 1.61
SDF2L1-201ENST00000248958 PITRM1Q5JRX3 1037 aa25.09■■□□□ 1.61
SDF2L1-201ENST00000248958 PLEKHA7Q6IQ23 1121 aa25.09■■□□□ 1.61
SDF2L1-201ENST00000248958 KIAA1211LQ6NV74 962 aa25.09■■□□□ 1.61
SDF2L1-201ENST00000248958 C14orf80Q86SX3 495 aa25.09■■□□□ 1.61
SDF2L1-201ENST00000248958 CYB5D2Q8WUJ1 264 aa25.09■■□□□ 1.61
SDF2L1-201ENST00000248958 HINFPQ9BQA5 517 aa25.09■■□□□ 1.61
SDF2L1-201ENST00000248958 ISCUQ9H1K1 167 aa25.09■■□□□ 1.61
SDF2L1-201ENST00000248958 TMEM245Q9H330 911 aa25.09■■□□□ 1.61
SDF2L1-201ENST00000248958 SUN2Q9UH99 717 aa25.09■■□□□ 1.61
SDF2L1-201ENST00000248958 INTS6Q9UL03 887 aaKnown RBP25.09■■□□□ 1.61
SDF2L1-201ENST00000248958 SPAG17Q6Q759 2223 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 I6L893 689 aaPredicted RBP25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 ZNF217O75362 1048 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 RHOBTB1O94844 696 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 EPHX1P07099 455 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 RETP07949 1114 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 HNRNPH3P31942 346 aaKnown RBP25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 ADRA1BP35368 520 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 NRG1Q02297 640 aaPredicted RBP25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 SULT2A1Q06520 285 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 ELF2Q15723 593 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 VSTM4Q8IW00 320 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 ZNF683Q8IZ20 524 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 GPR161Q8N6U8 529 aaKnown RBP25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 NTAN1Q96AB6 310 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 CNPY3Q9BT09 278 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 OSBPL2Q9H1P3 480 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 RETREG1Q9H6L5 497 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 FBRSQ9HAH7 460 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 SCINQ9Y6U3 715 aa25.08■■□□□ 1.61
SDF2L1-201ENST00000248958 DOCK4Q8N1I0 1966 aa25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 IGLV3-10A0A075B6K4 115 aa25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 E9PAM4 449 aa25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 PRKCHP24723 683 aa25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 GGCXP38435 758 aa25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 P2RY2P41231 377 aa25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 AIF1P55008 147 aa25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 HDAC4P56524 1084 aa25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 RPL7AP62424 266 aaKnown RBP25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 MAMLD1Q13495 774 aa25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 SH3PXD2AQ5TCZ1 1133 aa25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 CXorf57Q6NSI4 855 aaKnown RBP25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 SARM1Q6SZW1 724 aa25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 METTL3Q86U44 580 aaKnown RBP25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 CIR1Q86X95 450 aaPredicted RBP25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 FAM160A2Q8N612 972 aaPredicted RBP25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 MRPL47Q9HD33 250 aaKnown RBP25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 PPARGC1AQ9UBK2 798 aaKnown RBP25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 ADAMTS1Q9UHI8 967 aa25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 TBC1D30Q9Y2I9 924 aa25.07■■□□□ 1.6
SDF2L1-201ENST00000248958 CCP110O43303 1012 aa25.06■■□□□ 1.6
SDF2L1-201ENST00000248958 NDUFV2P19404 249 aa25.06■■□□□ 1.6
SDF2L1-201ENST00000248958 LPAL2Q16609 132 aa25.06■■□□□ 1.6
SDF2L1-201ENST00000248958 PLK5Q496M5 336 aa25.06■■□□□ 1.6
SDF2L1-201ENST00000248958 RNF219Q5W0B1 726 aaPredicted RBP25.06■■□□□ 1.6
SDF2L1-201ENST00000248958 SETD3Q86TU7 594 aaPredicted RBP25.06■■□□□ 1.6
SDF2L1-201ENST00000248958 KBTBD6Q86V97 674 aa25.06■■□□□ 1.6
SDF2L1-201ENST00000248958 OR8K1Q8NGG5 319 aa25.06■■□□□ 1.6
SDF2L1-201ENST00000248958 ZNF653Q96CK0 615 aa25.06■■□□□ 1.6
SDF2L1-201ENST00000248958 MRGPRX1Q96LB2 322 aa25.06■■□□□ 1.6
SDF2L1-201ENST00000248958 CNOT8Q9UFF9 292 aaKnown RBP25.06■■□□□ 1.6
SDF2L1-201ENST00000248958 ERVW-1Q9UQF0 538 aa25.06■■□□□ 1.6
SDF2L1-201ENST00000248958 MYO15AQ9UKN7 3530 aa25.06■■□□□ 1.6
SDF2L1-201ENST00000248958 LRP3O75074 770 aa25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 NNMTP40261 264 aa25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 ECT2LQ008S8 904 aa25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 CAMK2GQ13555 558 aaPredicted RBP25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 ARID5BQ14865 1188 aa25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 TSR1Q2NL82 804 aaKnown RBP25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 SLC36A4Q6YBV0 504 aa25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 SLFN11Q7Z7L1 901 aa25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 APCDD1Q8J025 514 aa25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 FNIP1Q8TF40 1166 aa25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 ZYG11BQ9C0D3 744 aa25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 DUSP15Q9H1R2 295 aaPredicted RBP25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 PRDM16Q9HAZ2 1276 aa25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 TMPRSS4Q9NRS4 437 aa25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 ZNHIT6Q9NWK9 470 aaKnown RBP25.05■■□□□ 1.6
SDF2L1-201ENST00000248958 SRGAP2O75044 1071 aa25.04■■□□□ 1.6
SDF2L1-201ENST00000248958 CNTN5O94779 1100 aa25.04■■□□□ 1.6
SDF2L1-201ENST00000248958 IRAK1P51617 712 aa25.04■■□□□ 1.6
SDF2L1-201ENST00000248958 SCAPQ12770 1279 aa25.04■■□□□ 1.6
SDF2L1-201ENST00000248958 MAP7D1Q3KQU3 841 aa25.04■■□□□ 1.6
SDF2L1-201ENST00000248958 C6orf118Q5T5N4 469 aa25.04■■□□□ 1.6
SDF2L1-201ENST00000248958 OR2T3Q8NH03 318 aa25.04■■□□□ 1.6
SDF2L1-201ENST00000248958 MRGPRX3Q96LB0 322 aa25.04■■□□□ 1.6
SDF2L1-201ENST00000248958 NCAPGQ9BPX3 1015 aa25.04■■□□□ 1.6
SDF2L1-201ENST00000248958 OR12D3Q9UGF7 316 aa25.04■■□□□ 1.6
SDF2L1-201ENST00000248958 PCDHGA5Q9Y5G8 931 aa25.04■■□□□ 1.6
SDF2L1-201ENST00000248958 SNX10Q9Y5X0 201 aa25.04■■□□□ 1.6
SDF2L1-201ENST00000248958 TMEM191CA6NGB0 347 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 DCLK1O15075 740 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 RHOCP08134 193 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 C7P10643 843 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 HLA-EP13747 358 aa25.03■■□□□ 1.6
SDF2L1-201ENST00000248958 MZF1P28698 734 aaPredicted RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms