RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 NYNRINQ9P2P1 1898 aaKnown RBP13.77□□□□□ -0.21
NUP85-201ENST00000245544 GOLGA6L7A0A1B0GV03 622 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 TCRBV9S1A1TA0A576 114 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 ZBBXA8MT70 800 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 CNTN5O94779 1100 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 STK10O94804 968 aaKnown RBP13.76□□□□□ -0.21
NUP85-201ENST00000245544 GJB5O95377 273 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 JCHAINP01591 159 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 IVLP07476 585 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 LSP1P33241 339 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 FDFT1P37268 417 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 TUFMP49411 452 aaKnown RBP13.76□□□□□ -0.21
NUP85-201ENST00000245544 PSEN1P49768 467 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 CRADDP78560 199 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 DMTNQ08495 405 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 PARP6Q2NL67 630 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.76□□□□□ -0.21
NUP85-201ENST00000245544 USP33Q8TEY7 942 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 C1orf74Q96LT6 269 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 HERC2P3Q9BVR0 1158 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 TMEM106CQ9BVX2 250 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 UBE2OQ9C0C9 1292 aaKnown RBP13.76□□□□□ -0.21
NUP85-201ENST00000245544 NOL6Q9H6R4 1146 aaKnown RBP13.76□□□□□ -0.21
NUP85-201ENST00000245544 IGLV3-27P01718 113 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 C1QAP02745 245 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 CHN1P15882 459 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 LAG3P18627 525 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 EN2P19622 333 aaPredicted RBP13.76□□□□□ -0.21
NUP85-201ENST00000245544 CBLBQ13191 982 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 ALFQ53S48 1182 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 RAP1GAP2Q684P5 730 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 TFAP2DQ7Z6R9 452 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 PRPF39Q86UA1 669 aaKnown RBP13.76□□□□□ -0.21
NUP85-201ENST00000245544 NLRP14Q86W24 1093 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 CIR1Q86X95 450 aaPredicted RBP13.76□□□□□ -0.21
NUP85-201ENST00000245544 IGSF8Q969P0 613 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 ACSS3Q9H6R3 686 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 IL23AQ9NPF7 189 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 OLA1Q9NTK5 396 aaKnown RBP13.76□□□□□ -0.21
NUP85-201ENST00000245544 COMMD8Q9NX08 183 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 CXXC1Q9P0U4 656 aaPredicted RBP13.76□□□□□ -0.21
NUP85-201ENST00000245544 IGSF9Q9P2J2 1179 aa13.76□□□□□ -0.21
NUP85-201ENST00000245544 FGF10O15520 208 aaPredicted RBP13.75□□□□□ -0.21
NUP85-201ENST00000245544 MAFKO60675 156 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 USP12O75317 370 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 APOEP02649 317 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 LINC00271P0C7V0 271 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 SPATA31D3P0C874 917 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 SLC2A3P11169 496 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 PHBP35232 272 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 SEC24CP53992 1094 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 NRG1Q02297 640 aaPredicted RBP13.75□□□□□ -0.21
NUP85-201ENST00000245544 MPP2Q14168 576 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 TEX44Q53QW1 395 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 SPATA31D4Q6ZUB0 917 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 DDX53Q86TM3 631 aaKnown RBP13.75□□□□□ -0.21
NUP85-201ENST00000245544 SRRM1Q8IYB3 904 aaKnown RBP13.75□□□□□ -0.21
NUP85-201ENST00000245544 CNTD1Q8N815 330 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 RTL3Q8N8U3 475 aaKnown RBP13.75□□□□□ -0.21
NUP85-201ENST00000245544 ZNF512Q96ME7 567 aaPredicted RBP13.75□□□□□ -0.21
NUP85-201ENST00000245544 CATSPERBQ9H7T0 1116 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 KIF9Q9HAQ2 790 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 ZC3H7BQ9UGR2 993 aaKnown RBP13.75□□□□□ -0.21
NUP85-201ENST00000245544 YIPF1Q9Y548 306 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 ZNF840PA6NDX5 716 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 EFCAB14O75071 495 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 URODP06132 367 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 NFKB1P19838 968 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 NUMBP49757 651 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 GEMIN4P57678 1058 aaKnown RBP13.75□□□□□ -0.21
NUP85-201ENST00000245544 KBTBD12Q3ZCT8 623 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 AFMIDQ63HM1 303 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 NADSYN1Q6IA69 706 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 FBXL22Q6P050 247 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 FOXR1Q6PIV2 292 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 OTOP3Q7RTS5 596 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 TDRPQ86YL5 185 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 BADQ92934 168 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 PKNOX2Q96KN3 472 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 BTN2A3PQ96KV6 586 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 PAFAH2Q99487 392 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 FERMT1Q9BQL6 677 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 MLPHQ9BV36 600 aaPredicted RBP13.75□□□□□ -0.21
NUP85-201ENST00000245544 FRMD8Q9BZ67 464 aaPredicted RBP13.75□□□□□ -0.21
NUP85-201ENST00000245544 BRD8Q9H0E9 1235 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 STMN4Q9H169 189 aaPredicted RBP13.75□□□□□ -0.21
NUP85-201ENST00000245544 PPANQ9NQ55 473 aaKnown RBP13.75□□□□□ -0.21
NUP85-201ENST00000245544 UBP1Q9NZI7 540 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 TTLL3Q9Y4R7 772 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 MAD1L1Q9Y6D9 718 aa13.75□□□□□ -0.21
NUP85-201ENST00000245544 ALPK3Q96L96 1907 aa13.74□□□□□ -0.21
NUP85-201ENST00000245544 TEX28O15482 410 aa13.74□□□□□ -0.21
NUP85-201ENST00000245544 PAPOLAP51003 745 aaKnown RBP13.74□□□□□ -0.21
NUP85-201ENST00000245544 SESN2P58004 480 aaPredicted RBP13.74□□□□□ -0.21
NUP85-201ENST00000245544 PLD1Q13393 1074 aa13.74□□□□□ -0.21
NUP85-201ENST00000245544 LRRC8BQ6P9F7 803 aa13.74□□□□□ -0.21
NUP85-201ENST00000245544 UNC5AQ6ZN44 842 aa13.74□□□□□ -0.21
NUP85-201ENST00000245544 TADA2BQ86TJ2 420 aa13.74□□□□□ -0.21
NUP85-201ENST00000245544 ATPAF2Q8N5M1 289 aa13.74□□□□□ -0.21
NUP85-201ENST00000245544 ATP6V0D2Q8N8Y2 350 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms