RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 CENPXA8MT69 81 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 LACTBL1A8MY62 500 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 FCHO1O14526 889 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 RGL2O15211 777 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 VAPBO95292 243 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 KLRC2P26717 231 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 HPCAL1P37235 193 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 ZNF844Q08AG5 666 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 MCOLN3Q8TDD5 553 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 PRKAG3Q9UGI9 489 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 ZNF112Q9UJU3 913 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 BTN3A1O00481 513 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 MRASO14807 208 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 RGS14O43566 566 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 RTN3O95197 1032 aaPredicted RBP11.77□□□□□ -0.53
LAMA4-201ENST00000230538 CCDC130P13994 396 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 SSTR1P30872 391 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 FMO4P31512 558 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 MFSD10Q14728 455 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 CYP20A1Q6UW02 462 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 GATAD2AQ86YP4 633 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 OR6Y1Q8NGX8 325 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 VCPIP1Q96JH7 1222 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 ADI1Q9BV57 179 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 RIBC2Q9H4K1 309 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 DAPK2Q9UIK4 370 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 RABGEF1Q9UJ41 708 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 TRIM43BA6NCK2 446 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 LDLRP01130 860 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 YBX3P16989 372 aaKnown RBP eCLIP11.77□□□□□ -0.53
LAMA4-201ENST00000230538 TYMPP19971 482 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 GPR15P49685 360 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 CACNA2D1P54289 1103 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 LZTR1Q8N653 840 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 UXS1Q8NBZ7 420 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 METTL6Q8TCB7 284 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 ATXN2LQ8WWM7 1075 aaKnown RBP11.77□□□□□ -0.53
LAMA4-201ENST00000230538 RNF145Q96MT1 663 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 IL17RBQ9NRM6 502 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 SPG21Q9NZD8 308 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 GAKO14976 1311 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 ABCA9Q8IUA7 1624 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 TMEM150BA6NC51 233 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 H3BN98 237 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 TGFB3P10600 412 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 PECAM1P16284 738 aaPredicted RBP11.77□□□□□ -0.53
LAMA4-201ENST00000230538 STX4Q12846 297 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 FAM126BQ8IXS8 530 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 ATXN3LQ9H3M9 355 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 GBA2Q9HCG7 927 aaPredicted RBP11.77□□□□□ -0.53
LAMA4-201ENST00000230538 MRPL39Q9NYK5 338 aaKnown RBP11.77□□□□□ -0.53
LAMA4-201ENST00000230538 ENOPH1Q9UHY7 261 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 VPS51Q9UID3 782 aa11.77□□□□□ -0.53
LAMA4-201ENST00000230538 GJB6O95452 261 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 RPN2P04844 631 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 ETS1P14921 441 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 PAICSP22234 425 aaKnown RBP11.76□□□□□ -0.53
LAMA4-201ENST00000230538 PIK3R1P27986 724 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 SLC6A3Q01959 620 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 SLC34A1Q06495 639 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 NAB1Q13506 487 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 HLA-DQA1Q5Y7H0 255 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 AADACL2Q6P093 401 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 DEFB106AQ8N104 65 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 REPS2Q8NFH8 660 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 ACTRT2Q8TDY3 377 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 MTFMTQ96DP5 389 aaKnown RBP11.76□□□□□ -0.53
LAMA4-201ENST00000230538 RMND5BQ96G75 393 aaPredicted RBP11.76□□□□□ -0.53
LAMA4-201ENST00000230538 SMPD4Q9NXE4 827 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 USP20Q9Y2K6 914 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 RARAP10276 462 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 MMP14P50281 582 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 HIRAP54198 1017 aaPredicted RBP11.76□□□□□ -0.53
LAMA4-201ENST00000230538 TMEM119Q4V9L6 283 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 C9orf131Q5VYM1 1079 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 POMGNT2Q8NAT1 580 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 SLC16A10Q8TF71 515 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 PNMA5Q96PV4 448 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 COPG2Q9UBF2 871 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 PDHXO00330 501 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 MYL12AP19105 171 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 TKTP29401 623 aaKnown RBP11.76□□□□□ -0.53
LAMA4-201ENST00000230538 BCL2L1Q07817 233 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 C16orf59Q7L2K0 433 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 SETD9Q8NE22 299 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 SLC2A14Q8TDB8 520 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 MPP4Q96JB8 637 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 HGH1Q9BTY7 390 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 CDHR5Q9HBB8 845 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 LRRC4BQ9NT99 713 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 PAEPP09466 180 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 AXLP30530 894 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 RARRES1P49788 294 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 SLC12A3P55017 1021 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 REXO4Q9GZR2 422 aaKnown RBP11.76□□□□□ -0.53
LAMA4-201ENST00000230538 ELOVL4Q9GZR5 314 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 DNPEPQ9ULA0 475 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 SPATA2Q9UM82 520 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 GCNT1Q02742 428 aa11.76□□□□□ -0.53
LAMA4-201ENST00000230538 PPATQ06203 517 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms